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Name : gspE (DMR_28380) Accession : YP_002954215.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3199053 - 3200855 bp Length : 1803 bp Strand : + Note : - DNA sequence : ATGGACAGGCTGCCGGATTTCCGGCGCATGGCCCACCGTCTGGCCGCCCTGTGCCGGCTGCCCCTGGCCCGGGGCGGCCG CGTCGCGGCGGGCCAAGCGACGCCCGGCCCGCCGCGGCCATCGCTCTTAGAGCCCATGGCCGAAACCCTGGCCCTGCCCC TGGCCGCCCTGGAAGACGCTTTTACCGAGGCCGCCCGGGCCGGCCAAAATCCCTTCAAGCGCCTGGCCGAACTCCACAAG GTCGACGCGGGGCTGGCCGCCTCGGCCCTGGCCGCCAGCCTCGGTCTGCCCTATCTCGAAGCCATCGACGTCAGCGACGA GGACGCCGAGCGCATCCGCCGACTGCCTTTTGGCTATCTCAAGCGCAATCTGGCCGTACCGGTTGCCCTGGACGGCCGGC AGCTTGTGGTCCTGGCCGATCCCTTCGCGCCGGAGCTGGCCGATGACCTGCGCCGGCTGCTCGGCCAGCCCGATCTCGCC GTGGCCCTGGCCCTGCCCGAGACCATCGTTTCGGCCATCAACCACGCCCACGGCGAAGCCGAGGGCGAGCGCGACCCCAG GCTCGACAACCTGAGCCTGGACGATTTCATGGGGCCGCCGCCGGAGAACATGTCCACCGAGGACCTCCTGGACGAGACCA GCAACGCCCCGGTCATCCGGCTGGTCAACCAGCTCCTGGCCCAGGCCGTGCGCGACCTGTGCAGCGACATCCACATCGAG CCCTACCAGAATTCGCTGAAAATCCGCTTCCGCCTCGACGGCGTGCTCTACGACATCAAGACCCTGGACAAGCGCTGGCA TCCGCCCGTCGTGTCCCACGTCAAGATCCGCTCCAAGCTCGACATCGCCGAGCGCCGCCTGCCCCAGGACGGCAGCTTCG ACATCCGCCTGGGCAACCGCAACGTGGACATCCGGGTGTCGGTGTTTCCCACCAAGTTCGGCGAACGGCTCGTGCTGCGG CTGCTGGAAAAAAACAGCCGCATCCTGAGCCTTGGCGAACTGGGGCTTTCCCCCGGCCATTTCGAGGAACTAAGCGCCCT GGCCAGGCTCCCCCACGGCATCATCCTGGTCACCGGCCCCACCGGCTCGGGCAAGTCCACCACCCTCTACGCGCTCATAA ACCACATCAATTCCACGGACAAAAACATCCTCACCATCGAGGACCCGGTGGAATACCAGATCGAGGGCGTGGGGCAGATG CAGGTCAACGCCAAGATCGACCTGACCTTTGCCGGCGGCCTGCGCTCGATTCTGCGCCAGGACCCGGACGTCATCCTGGT CGGCGAAATCCGCGACACCGAAACGGCGCAAATCGCCTGCCAGGCGGCGCTCACCGGCCACCTCGTCTTTTCGACCCTGC ACACCAACGACGCCGCCTCGGCCGTCACCCGCATGGTGGACATGGGCATCGAACCCTACATGGTCTGCTCGGTGGTGCGG GCGCTCATCGCCCAGCGCCTGGTGCGGGTCCTGTGCCCACACTGCAAGGAAGCCTTCGTGCCCACCGAGGAAGACCTGCT GCCCTTTGGCCCCGGCGCGGCCGCCCTGGCCGGCCGGAGCTTTTGCCGGGCCGTGGGCTGCCCTCAGTGCATGGGCACAG GCTACCGAGGCCGCACCTCCATCCACGAACTCCTGGTCATCGACGAAGCCATGGCCGAACTGATCCTGCACAATCCCGAA GCCGGCCGCATCCGCGCCGCGGCCATGGCCGCCGGCATGGCCACCCTGCGCCAGGACGGCATGGACAAAATCCTGCGGCA TATCACGACCATGGAAGAGGTCATACGGGCCACGGTGGTCTGA Protein sequence : MDRLPDFRRMAHRLAALCRLPLARGGRVAAGQATPGPPRPSLLEPMAETLALPLAALEDAFTEAARAGQNPFKRLAELHK VDAGLAASALAASLGLPYLEAIDVSDEDAERIRRLPFGYLKRNLAVPVALDGRQLVVLADPFAPELADDLRRLLGQPDLA VALALPETIVSAINHAHGEAEGERDPRLDNLSLDDFMGPPPENMSTEDLLDETSNAPVIRLVNQLLAQAVRDLCSDIHIE PYQNSLKIRFRLDGVLYDIKTLDKRWHPPVVSHVKIRSKLDIAERRLPQDGSFDIRLGNRNVDIRVSVFPTKFGERLVLR LLEKNSRILSLGELGLSPGHFEELSALARLPHGIILVTGPTGSGKSTTLYALINHINSTDKNILTIEDPVEYQIEGVGQM QVNAKIDLTFAGGLRSILRQDPDVILVGEIRDTETAQIACQAALTGHLVFSTLHTNDAASAVTRMVDMGIEPYMVCSVVR ALIAQRLVRVLCPHCKEAFVPTEEDLLPFGPGAAALAGRSFCRAVGCPQCMGTGYRGRTSIHELLVIDEAMAELILHNPE AGRIRAAAMAAGMATLRQDGMDKILRHITTMEEVIRATVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-95 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-95 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002954215.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-95 | 43 |
| gspE | YP_002954215.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-89 | 42 |
