Gene Information

Name : DMR_27140 (DMR_27140)
Accession : YP_002954091.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3035622 - 3036326 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGGCCAGGCGTCCCCCGGCGAAGGCGAGCCGCTTATCCGCCTAACCGACGTCACCCGCAGCTACGTCATGGGCGG
CGTGGCCAACACGGTGCTCTCCGGGGTGACCCTGGACATCGCGGCCGGCGAATTCGCGGCCATCATGGGCCCGTCGGGCT
CTGGCAAGTCCACTCTGCTCCACATCCTGGGCCTGCTCGACCGCCCCACTTCCGGCAGCTACCGGCTGCGCGGCCAAGAG
ACCGGCACGCTGTCCGACGACGCCCTGTCCCATCTGCGAAACCAAGCCATTGGCTTCGTCTTCCAGAGCTTTTACCTCAT
CCCTTACGCCACCGCCCTGGACAACGTGCTGCTCCCGGGGCTCTACAGCGACGCCCCGCGCGCGGCCCTTGTCCGGCGGG
CGGGAGAACTCCTGGACAAGGTCGGGCTGTCGGCCCAGGCCCGACACAAGCCTTCCCAGCTCTCCGGCGGCCAGCAGCAG
CGCGTGGCCCTGGCCAGGTCGCTTATAAACGACCCGGACCTCATCCTGGCCGACGAACCCACCGGCCAGCTCGATTCCGG
CACCAGCCGCGAAATCATGGAACTCCTCGCCGCCATCAACCGCGACGCCGGCAAGACGGTCATCGTCGTCACCCACGACC
CGGACACCGCCGCCTACGCCCGTCGCCAGATTCTCGTGACCGATGGCCGTGTGGCGCGTTCTTAG

Protein sequence : 
MTGQASPGEGEPLIRLTDVTRSYVMGGVANTVLSGVTLDIAAGEFAAIMGPSGSGKSTLLHILGLLDRPTSGSYRLRGQE
TGTLSDDALSHLRNQAIGFVFQSFYLIPYATALDNVLLPGLYSDAPRAALVRRAGELLDKVGLSAQARHKPSQLSGGQQQ
RVALARSLINDPDLILADEPTGQLDSGTSREIMELLAAINRDAGKTVIVVTHDPDTAAYARRQILVTDGRVARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_27140 YP_002954091.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-55 53
DMR_27140 YP_002954091.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-43 51
DMR_27140 YP_002954091.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 43