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Name : dnaB (DMR_27010) Accession : YP_002954078.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3022782 - 3024236 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGGACACTCCACGGAAGAAACCGCGTAACGCCAGAGCCGCCGGCTCGGGAAGCGGCGAACCGCTGACCGGGCAGGCCCT GGAGCGGGTCTCTTCCGACGTCCTGCGAAAAGTTCCCCCCCAGAACCTCGAAGCCGAACAGTCGGTTTTGGGGGGGATTC TCCTCAAAAACGCCACGCTTTTCAATCTCGTCGATGTCATCGGCGAGGACGATTTCTACTCCCCGGCCCACCGCTTCATC TATCAGGCCATCCTCGATCTGGCCCGGCGCAACGCCCCGGTGGACCTCGTGTCCCTGGCCGAAGCCCTGCGCGCCTCGGG CAAGCTCGACGAGGTCGGCGGCCCGGCCTATCTGGCCGAGCTGGCCTCGGCCACGGTCTCGGCCGCCAACGCCGCCCACC ACGCCGAGATCGTCCGCGAAAAATCCGTCCAGCGCCGGCTCATCAGCACCGCCGTGGACATCATCAGCAGCTGCTACGAA GGGGCCCAGACCACCGAGCAATTGCTCGACGCCTCCGAGCAGGCCATTTTTTCCATCACCGACTCCAAGGCCACCAAGGG ACTCAAGTCCTCCAAGGACATCATCCACAACGTGTTCGAGCAGATCGAACAGCGCATGGAGAACAAGGAACTCGTCACCG GCGTGGCCTCGGGCTACTACCAGTTCGACGAGATGACCGCCGGTCTCCAGCCCTCCGATCTCATCATCGTGGCCGGCCGC CCGTCCATGGGCAAGACCGCCTTTGCCATGAACGTGGCCATGCGCGCCGCCGCCATGTCGGCCATTCCCACGGCCGTTTT TTCCCTGGAAATGTCCATGGAGCAGATCATGCAGCGCATGCTGTGCTGCTGGGGCAAGGTCGATCTGGCCAAGCTGCGCC GGGCGCGCCTTGACGACGAGGACTGGTCGCGGCTCTACGACGCGGCCAACCATCTGTCCGCCTCGCCCATTTTCGTGGAC GACACTCCGGCCATCACCACCATGGATCTGCGCGCCCGCTGCCGCCGCCTCAAGGCCGAGCACGGCCTTGGGCTCATCAT GGTGGACTACCTCCAGCTCATGCGCGCCTCGCGCCACATCGATTCCCGCGAGCAGGAAATTTCCGACATCTCCCGAAGCC TCAAGGCCCTGGCCAAGGAGCTGCACGTGCCGGTGGTGGCCCTGTCCCAGCTCAACCGCAAGGTCGAGGAGCGCGCCGAC AAACGCCCCATGATGTCCGACCTGCGCGAATCCGGGGCCATCGAACAGGACGCCGACGTCATCATCTTTCTCTACCGCGC CGCCGCCTATAAGAAAAAGGAAGAGCTCACCCCCGAGGACAACGTGGCCGAGGTCATCATCGGCAAGCAGCGAAACGGCC CCACGGGCATGGTGAAGCTGCTGTTCCTCAAGGAATCGACGGCGTTCGAGAACCTCTCCGACATCCCGCCCCCGTCCGAA TTCGGCATGGGCTGA Protein sequence : MDTPRKKPRNARAAGSGSGEPLTGQALERVSSDVLRKVPPQNLEAEQSVLGGILLKNATLFNLVDVIGEDDFYSPAHRFI YQAILDLARRNAPVDLVSLAEALRASGKLDEVGGPAYLAELASATVSAANAAHHAEIVREKSVQRRLISTAVDIISSCYE GAQTTEQLLDASEQAIFSITDSKATKGLKSSKDIIHNVFEQIEQRMENKELVTGVASGYYQFDEMTAGLQPSDLIIVAGR PSMGKTAFAMNVAMRAAAMSAIPTAVFSLEMSMEQIMQRMLCCWGKVDLAKLRRARLDDEDWSRLYDAANHLSASPIFVD DTPAITTMDLRARCRRLKAEHGLGLIMVDYLQLMRASRHIDSREQEISDISRSLKALAKELHVPVVALSQLNRKVEERAD KRPMMSDLRESGAIEQDADVIIFLYRAAAYKKKEELTPEDNVAEVIIGKQRNGPTGMVKLLFLKESTAFENLSDIPPPSE FGMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 7e-63 | 45 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-67 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-57 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-65 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-66 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-57 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-57 | 41 |
