Gene Information

Name : lspA (DMR_22180)
Accession : YP_002953595.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 2497560 - 2498051 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
ATGCGTAAAAGCTATCGGATCGCCCTGCCCATCGCCGTGCTGGTGGTCATCCTGGACCAGCTCACCAAGCTGTGGATCCA
GGACCACATGGTGCTTTACACCACCCGCACGGTGATCCCGGGCTTTTTCAACATCGTCCACGTGCTCAACCGCGGGGCGG
CGTTTGGATTTCTCAACCGCTCCGACATCCAGTGGCAGACCTATTTCTTTTTTGCCGCCACCGCCCTGGCCGTGCTCATC
ATCTTCCACTTGCTGCGCATGGCCCGCGATGACGACAAGCTGCTCATCACCGGGCTGGGCCTTATCCTCGGCGGGGCCGT
GGGCAACCTCATCGACCGCATCAAGACCGGGGAAGTCGTGGATTTCCTGGACTTCTACTGGAAAACCTTTCACTGGCCGG
CTTTCAACGTCGCCGATATCGCCATTTTCCTCGGGTCGCTGGGGCTGGTGTTCGCCTTCTACCGCCTGCGCCGGCCGCCC
CAGGATTCCTGA

Protein sequence :
MRKSYRIALPIAVLVVILDQLTKLWIQDHMVLYTTRTVIPGFFNIVHVLNRGAAFGFLNRSDIQWQTYFFFAATALAVLI
IFHLLRMARDDDKLLITGLGLILGGAVGNLIDRIKTGEVVDFLDFYWKTFHWPAFNVADIAIFLGSLGLVFAFYRLRRPP
QDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-13 44
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-13 44
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-13 44
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 7e-14 44
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 7e-14 44
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 7e-14 44
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-13 44
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 5e-13 44