|
Name : tkt (DMR_21080) Accession : YP_002953485.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2383148 - 2385142 bp Length : 1995 bp Strand : - Note : - DNA sequence : ATGACCACCGCATCCGCCAGCGACGCCCAGGCCGTCAACGTCATCAAAGGCCTCATCATGGACGCCACCCGCAAGGCCGC CTCCGGCCACCCGGGCGGAGCCATGTCTTCCGCGGACATGGCGTACGTGCTGTTCAAGGACTACCTGCGCTACGATCCGG CCGATCCGACCTGGTTCGACCGCGACCGGTTCGTGCTCTCGGCCGGCCACGAGTCCATGCTGCTCTACGCTTTGCTGCAT CTGCGCGGGCTTTTGACCATGGAAGACCTTGAGCATTTCCGGCAGTTCGGCAGTAAAACCCCGGGCCATCCCGAGAATTA CGAGACCCCGGGCGTCGAGTGCACCACCGGGCCGCTGGGCCAGGGCTTTTCCATGTCCGTGGGCATGGCCGTTGCCGAGG CCATGTTGCGCGAGCGCCTGGGCGACGACGTCGCCGGGCATTACACCTATGTCCTTTCTTCCGACGGCGACGTCCAGACC CCGGTGTTCCAGGGTTCGGCCGCCCTGGCCGGCCTGTGGGGACTGGGACGGCTCATCGTTCTTTTCGACAAGAACCAGGT CCAGCTCTCGGGGCCGGTGGCCATCTGCGACCATGTGGACTATGCTAAGCTCTTTACGAGCATGGGCTGGCATGTCGTCG AGATCGACGGCCACGACCATGCCGCCATCAGGACGGCCATCGAGGCGGCCAAGGCCGAAACCTCCCGGCCGTCCATGATC ATCGGCCTGACCACCATCGCCAAGGGTTCCTGCACCATGGAGGGCGACTGCGCTTCCCACGGCGCGCCCTTTAGCGAAGA CGAGATCAAGGCCACCAAGAAAAACCTCGGTTTGCCCGAAGACCGGAAATTCTACCTGCCGGCCGAGGTGGGCAAGCATT TCCGCGCCCGCTGGCCCGAGCTGGTCGCCGCCCGCAAGGCCTGGGACAAGACCCTGGAAGCCAAGCTGGCCGCCGACGCC GGCTTCGAGGACCTCTGGCGGCAGGCCAAGCGCGCCCCGGGCAACCGGACCTTCAACTGGCCGACCTTCGACCCGGCCAA GGCCGTGGCCACCCGTTCGGCCTGGGGCAAGGCGCTGGACGCCATCACCCCGGACTTCCCGCTTCTTGTCGGCGGTTCGG CCGACCTCGATCCGTCCAACCAGACCGAGAAGTTCCGCAAGACCACCGGCGTCTTCGGGCCGGAGAACAAACTCGGCCGC ACCCTGTGCTTCGGCGTGCGCGAATTCCCTATGGGGGCCATCGTCAACGGCATCACGCTCCACGGCGGGCTCATGGCCTT TGGCGCGACCTTCCTCATCTTCTCCGACTACGAGCGCAACGCCCTGCGCATGGCCGCGCTGCAGCGCATTCCGGCCCTGC ACGTGTTCACCCACGATTCCTTCTACGTTGGCGAGGACGGCCCCACCCACGAGCCCATCGAGCAGACCAGCTCCCTACGC CTTATTCCAAACATGCTCGTCATGCGCCCGGCCGACGCCTACGAGACTTGCGCCTGCCTGGAAATGGCGCTGACCCGGGT CAACCGGCCGACCTGTCTGCTCCTCACCCGCCAGAACCTCCCGGTCCTTGATCCGGCCCACTATCCCGGACTCCAGGAAG GGACGGCCAAGGGCGGCTACGTCCTGGTCGAGCCGGAAGGCGGCAAGCCGGACATGATCCTTCTGGCCGCCGGCTCGGAA GTCTCCCTGGCCATGGCCGCGGCCAAGCTCTTGCCGGAGCTGGCCATCCGCATCGTCAGCATCCCCTGCATGGAGATCTT CAACGAGCAGCCCGAGGCCTACAAGGAAAGCGTGCTGCCCTCGGCCATCCCCTTCCGCTTCGCCGTGGAAGCTGGCCGGC CCGAGCTGTGGTGCCAGTACACCGGCCGCATGGACCGCATCCACGGCATCTCGCGCTTTGGTGCCTCCGCCCCGGCCGAA AAGCTGGCCGAGGCCTATGGATTCACGCCCACAGCCCTGGCCGCCGCCGTCAAGGCCGCCTGGGAACGTCGATAA Protein sequence : MTTASASDAQAVNVIKGLIMDATRKAASGHPGGAMSSADMAYVLFKDYLRYDPADPTWFDRDRFVLSAGHESMLLYALLH LRGLLTMEDLEHFRQFGSKTPGHPENYETPGVECTTGPLGQGFSMSVGMAVAEAMLRERLGDDVAGHYTYVLSSDGDVQT PVFQGSAALAGLWGLGRLIVLFDKNQVQLSGPVAICDHVDYAKLFTSMGWHVVEIDGHDHAAIRTAIEAAKAETSRPSMI IGLTTIAKGSCTMEGDCASHGAPFSEDEIKATKKNLGLPEDRKFYLPAEVGKHFRARWPELVAARKAWDKTLEAKLAADA GFEDLWRQAKRAPGNRTFNWPTFDPAKAVATRSAWGKALDAITPDFPLLVGGSADLDPSNQTEKFRKTTGVFGPENKLGR TLCFGVREFPMGAIVNGITLHGGLMAFGATFLIFSDYERNALRMAALQRIPALHVFTHDSFYVGEDGPTHEPIEQTSSLR LIPNMLVMRPADAYETCACLEMALTRVNRPTCLLLTRQNLPVLDPAHYPGLQEGTAKGGYVLVEPEGGKPDMILLAAGSE VSLAMAAAKLLPELAIRIVSIPCMEIFNEQPEAYKESVLPSAIPFRFAVEAGRPELWCQYTGRMDRIHGISRFGASAPAE KLAEAYGFTPTALAAAVKAAWERR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-88 | 42 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-88 | 42 |
