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Name : gabD (DMR_17530) Accession : YP_002953130.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1950611 - 1952068 bp Length : 1458 bp Strand : + Note : NADP+ DNA sequence : ATGACGATGCTTCACGATATGCGCCTTTTCCGGGAAGCCTGCCTCATCAACGGCCAGTGGACGGCGGCCGATAACGGCGA GACCGTGGCCGTGGACAACCCGGCCACCGGCGAAATCTTCGGCCATGTGCCGCGCTGCGGCCGCGAGGAAACCCGCCGGG CCATCGAGGCCGCCCACGCAGCCTGGCCGGCCCTGCGGGCCATGACCGCCCTGGAGCGGGCCGACATGCTCCTGCGCTGG CATGACCTCATCTTGGCCAACAAGGACGATCTGGCTAAGCTCATGACCCTGGAGCAGGGCAAGTCCCTGGCCGAGTCGGC CGGCGAGATCGGCTACGGCGCGAGCTATATCCGCTGGTTCGCCGAAGAGGCCCGCCGGGCCTACGGCGACATCGTCCCCG CCAATGCCCGGGGCCGCATGATCCTCGTCACCCGCGAACCGGTTGGCGTGTGCGGCGTCGTCACGCCCTGGAATTTCCCC ATGGCCATGATCGGGCGCAAGGTCGGCCCGGCCCTGGCCATGGGTTGCCCCACGGTCGTCAAGCCTGCCTCCCAGACGCC GTTCTCCGCCCTGGCCCTGGGCGAACTGGCCATCCGGGCCGGCATCCCGGCCGGCGTGGTCAACATCGTCACCGGCAACG CCCGGGCCATCGGCGCGGAACTCACCGAAAACCCCACCGTGCGCAAGGTCAGCTTCACCGGCTCCACCGAGGTCGGCAAG GCGCTCATGGCCCAATGCGCCGGGACCGTCAAAAAGGTCTCCATGGAACTTGGCGGCAACGCGCCCTTTATCGTCTTCGA CGACGCCGACATCGACGCCGCCGTGGCCGGAGCCATGGCCAGCAAATACCGCAACTCCGGCCAGACCTGCATCTGCGCCA ACCGCTTCCTCGTCCAGGCCGGCATCCACGACGCCTTTGTTAAGCGGCTGGTGGAAGCCGTGGCCGGCCTGTCCGTGGGC AACGGCCTGGACCAGGGCGTGAACCAAGGCCCGCTCATTGACGGCAAGGCCGTGGCCCGCATGCACGCCCAGGTGGCCGA CGCCGTGGGCAAGGGCGGCCGGCTGGCCCTCGGTGGCAAGGCCCATGCCCTGGGCGGCAATTTCTTCGAACCCACGGTCA TCGCCCACGCCACCCCGGCCATGGCCTTTGCCAGGGAAGAGATCTTCGGCCCCCTGGCTCCGGTATTCCCCTTCGAGACC GAAGCCGAAGCCATCGCCATGGCCAACGATACCGAATACGGCCTGGCCGCCTACCTCTATACCCGCGACATCGGCCGGGC CATGCGCGTGTCCGGGGCGCTGGAATACGGCATGGTCGGCGTCAACGAGAGCCTCATCTCTTGCACCGAAGCGCCGTTCG GCGGCGTCAAGGAAAGCGGCGTGGGCCGCGAAGGCTCGCGCTACGGCATGGATGAGTACTCGGTGATGAAGTATACCTGC CTGGGCGGCTTGGCGTAG Protein sequence : MTMLHDMRLFREACLINGQWTAADNGETVAVDNPATGEIFGHVPRCGREETRRAIEAAHAAWPALRAMTALERADMLLRW HDLILANKDDLAKLMTLEQGKSLAESAGEIGYGASYIRWFAEEARRAYGDIVPANARGRMILVTREPVGVCGVVTPWNFP MAMIGRKVGPALAMGCPTVVKPASQTPFSALALGELAIRAGIPAGVVNIVTGNARAIGAELTENPTVRKVSFTGSTEVGK ALMAQCAGTVKKVSMELGGNAPFIVFDDADIDAAVAGAMASKYRNSGQTCICANRFLVQAGIHDAFVKRLVEAVAGLSVG NGLDQGVNQGPLIDGKAVARMHAQVADAVGKGGRLALGGKAHALGGNFFEPTVIAHATPAMAFAREEIFGPLAPVFPFET EAEAIAMANDTEYGLAAYLYTRDIGRAMRVSGALEYGMVGVNESLISCTEAPFGGVKESGVGREGSRYGMDEYSVMKYTC LGGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-122 | 60 |
