Gene Information

Name : DMR_15940 (DMR_15940)
Accession : YP_002952971.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1683
EC number : -
Position : 1761654 - 1762613 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGGATTCCATACGTGTCGGGGTCAGCTCCTGCCTGCTCGGCAATCCCGTCCGCTACGACGGCGGCCACAAACGCGA
CAGCTACGTCGTCGATACCCTGGGCCGCTATTTTGAATTCGTGCCCGTGTGCCCGGAGGTCGAATGCGGCCTGGGCGTGC
CGCGCGAAGCCATGCGGTTGGTCGGCGACCCCGAGGCCCCGCGCCTGGTCACCATCAAGACCGGCGTCGATCTCACCGAG
CGCATGAACGCCTGGGCAGCGGGGCGCGTGGCCGAACTGGCCGAGGAGCGACTGTGCGGTTTCATCTTCAAGGCCAAGTC
GCCCTCCAGCGGCATGACCCGGATCAAGGTCTATAATGATAAGGGTGCTCCGGCCGAACGCGGGGTCGGTCTTTTCGCCC
GGGCCTTCATGGACCGCTTTCCGCTGATCCCGGTAGAGGACGAAGGGAGGCTCCACGACGACAAGCTGCGGGAAAACTTC
ATCGAACGCATATTTGCCATGCAGCGCTTCCGCGACGCCGTGGCCGGCGACGGCCGCTCGACCCTGGTTTCGCGACTCAT
CGCCTTCACCGCCGGGCACAAGCTGCTGTTCATGGCCCACAGCCCGGAGCTGGCCCGGCAAATCGGCCGGCTCACGGCCG
AAGCCAGCAAATGGCCGGCCGACGGCCTCGTCCATGCCTACGAGACCCTGCTCATGAAAACCCTGGCCCTGCCGGCCACC
CCGGCCAAGCACGCCAACGTGCTCCAGCACGCCATGGGCTATTTCAAAAAAGTGTTGACCACCTACGAGAAAGCGGAACT
CAACGAAGTCATCGCCAACTACCGCCTGGGGCTTACCCCGCTCATCGTTCCCGTAACGCTCATCGCCCACTTCACCCGCA
AATACGACGTGGCCTATTTAAAGGACCAGGCCTACTTGGCCCCTCACCCCATTGAACTCAAACTGCGCAACCACGCCTGA

Protein sequence : 
MSDSIRVGVSSCLLGNPVRYDGGHKRDSYVVDTLGRYFEFVPVCPEVECGLGVPREAMRLVGDPEAPRLVTIKTGVDLTE
RMNAWAAGRVAELAEERLCGFIFKAKSPSSGMTRIKVYNDKGAPAERGVGLFARAFMDRFPLIPVEDEGRLHDDKLRENF
IERIFAMQRFRDAVAGDGRSTLVSRLIAFTAGHKLLFMAHSPELARQIGRLTAEASKWPADGLVHAYETLLMKTLALPAT
PAKHANVLQHAMGYFKKVLTTYEKAELNEVIANYRLGLTPLIVPVTLIAHFTRKYDVAYLKDQAYLAPHPIELKLRNHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-54 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-54 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-54 42
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-54 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_15940 YP_002952971.1 hypothetical protein VFG0490 Protein 3e-54 42