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Name : hsdR (DMR_15220) Accession : YP_002952899.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : type I restriction enzyme R protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1676537 - 1679677 bp Length : 3141 bp Strand : + Note : - DNA sequence : ATGGCTTTTATCTCCGAAGCAGACGTCGAGGGCGTCCTGCTCGAAACGCTGGGCAGCCTCGGCTACGCCGCCACCTCAGA CCTCCAAATCGGCCCTGACGGCCATGCCCCGGAGCGTGAGGCGTACTCAGACGTCTTCCTTCAAAAACGTCTGGAAGCCG CTGTGGAGGCCCTTAATCCTCATATCCCGGCCGAGGCCCGGCACGACGCCATCCGGGCGCTGATCGCCACCGAATTCCCT AATCTGACCGAAGAGAACCGCCGCCTCCATCGCATGATGGTCGAAGGTGTGGACGTCGAGTTCCCCCGAGACGACGGCTC CATTGCCGGCGACAAAGTGCGCCTGATCGACTTTGACACCCCGGATAACAACGACTGGCTGGCGGTCAACCAGTTCACGG TGATTGAAGGAAAGATCAACCGCCGCCCCGATGTGGTGGTCTTCGTCAACGGTCTGCCACTTGGCGTCATCGAACTCAAG AACCCCGGCACCGAGAACGCCGACCTGGAAGCCGCCTTCAACCAGTTGCAAACCTACAAGACCCAGGTCACGTCCCTTTT CCGCACCAATGCCGTCCTCGTTACCTCCGATGGCCTCCAAGCCCGCATCGGCTCCCTGACGGCCAACCAGGAACGGTTCA TGCCCTGGCGCACCACGGACGGGAAAGAGGTCGCCAAGAAAGGACTGCCCGAACTCCACGTGCTTATCGAGGGGGTCTTT GAGAAGCGCCGGTTCCTGGACCTGATCCGCGACTTCACCGTCTTCGGTGAAACCGGCTCCGGCATTGCCAAGATCATCGC CGGCTACCACCAGTACCATGCCGTGCGCCATGCCGTGGCCCATACCGTCAAGGCGGCCGCGCCCAAGGGTGACCGTCGGG CAGGAGTCATCTGGCATACCCAGGGCTCGGGAAAAAGCCTGCTCATGGCTTTTTACGCCGGCCAGTTGGTGCGATGTCCT GAACTCGAAAACCCGACCATCGTGGTCATCACCGACCGCAACGATCTCGACGACCAGTTGTTCAACACCTTCTCCATGTG CCGTGACCTCATCCGGCAGACGCCCATCCAGGCAACGAACCGCGAGGATTTGCGCAAGGCCCTCAACCGTGCGTCCGGTG GCGTCATCTTCACGACCATCCAAAAATTCACACCCGAGAAGGGCGACTCGGAATACCCCTTGCTCACCGACCGGCGCAAC GTGGTGGTCATCGCTGACGAAGCCCACCGGAGCCAGTACGGGTTCAAAGCCAAGGTGGCCCAAAAGACCGGGGAGATCGC CTACGGATTCGCCAAATACCTGCGGGATGGCCTGCCCAATGCCTCCTTCATCGGCTTCACCGGGACGCCCATTGAAAAAG ACGACGTGAACACCCCGGCGGTCTTCGGTCACTACATTGACATTTACGACATCAGCCGCGCCGTCGAGGACGGAGCCACG GTGCCGCTCTATTATGAAAGCCGTCTTGCCCGGATCGAACTCTCCGCCGAGGAAAAGCCCAAGATCGACGAAGAAATCGA AGAGTTGACCGAGGACGACGCCGTCAGCGAGCAAGAGGCATTGAAGCGGAAGTGGGCCACGGTCGAAGCCCTGGTGGGCG CTGAAAAACGGCTCAAGCTCATCGCCCAGGACCTTGTTCGGCATTTCGAGGATCGGGTGGCGGCCATGGACGGCAAGGCC ATGGTGGTCTGTATGAGCCGCCGCATCTGTGTCGCCCTTTACAACGAAATAGTGGCCCTACGGCCGGCGTGGCACAGCGA TGATGACAATGAGGGCGTGGTCAAAGTCGTCATGACCGGTTCCGCGTCCGACCCGGCGGACTGGCAACCCCATGTCGGCA ACAAAGCCCGACGAGAATTGCTGGCCAAACGGGCCAAGGCTCCGAAGGACACGCTGAAGTTGGTGCTCGTCCGCGACATG TGGCTGACAGGCTTTGACGCCCCATCCATGCACACCATGTACGTCGACAAGCCCATGAAGGGCCACGGCCTCATGCAGGC CATTGCCCGGGTCAACCGGGTTTTTCGTGACAAGCCGGCCGGGCTCGTCGTTGATTACATTGGCATCGGGCAGAGCCTCA AAAACGCCCTGGGGCAGTACTCAGCTTCCGACAGGAGCCAGGCAGGCATTGACGAAGGAAAGGCCGTCGCCGTCATGATG GAGAAATTTGAAATCGTGACCGCGATGTTCCATGGGTTCGATTACCAGCGAGCCATGACCGGGACCGCCCATGACCGGCT CATGGTCATGGCCGAGGCCCTGGATTGGATTCTGGAACAGCAGCATAAGGCCGCCGAGAAGGAAACCGACGACGGCAAGA AGAAAGAAGCCCATCGTCGTTTTCAGGATGCCGTGCTGGCTCTGTCCAAGGCGTTCGCCCTGGCCGCAGCCAGTGATGAG GCGCGGTCCATACGAGACGAGGTCGCCTTCTTCCAAACCATCCGCGCCGCGTTGACCAAGACCGGCATCGGAGGAGGAAA AACCACGGCTGAGCGTGAGTTTGCGGTCCAGCAACTCATCAACCGGGCCGTGGCTTCGACCGAGATCGTGGACATCCTCG CCGCCGCCGGCTTGAATACACCGGATATTTCCATCCTGTCGGATGAGTTCCTGGTCGAAGTGCAGCAGATGGAGAAGAAG AACCTCGCCCTGGAGGCGCTGAAAAAGCTCCTGAATGGCGAAATTCACTCCCGCACCCGGACCAACGTGGTCGAAACCAA GAAATTCTCCGAGCGCCTGGAGAAAGCCATTGCCCGGTACCACACCAACGCCGTCAGCACCGTCGAGGTCATCCAGGAGT TGATCAACCTCGCCAAGGACATTCGGGAGGCTCGGCTTCGCGGTGAGGCACTTGGGCTGTCCCAGGACGAGATCGCTTTC TATGATGCCCTGGCCGAGAACCAAAGCGCTGTAGATGTCATGGGGGACGCATCCTTGCGGGTCATCGCCCATGAGCTATT GACCAGCCTCAAGGGTAGCATCACCGTCGATTGGGCACACCGGGAAAGCGCCCGTGCCAGGATGCGAGTGCTGGTGAAGC GGATTCTTAAGCGGCATGGCTACCCGCCCGACCTCCAGGACGCAGCCATCCAGGTGGTCCTACAGCAAGCGGAGGCGTTG TCGGCGCAGTGGGCCGCCTGA Protein sequence : MAFISEADVEGVLLETLGSLGYAATSDLQIGPDGHAPEREAYSDVFLQKRLEAAVEALNPHIPAEARHDAIRALIATEFP NLTEENRRLHRMMVEGVDVEFPRDDGSIAGDKVRLIDFDTPDNNDWLAVNQFTVIEGKINRRPDVVVFVNGLPLGVIELK NPGTENADLEAAFNQLQTYKTQVTSLFRTNAVLVTSDGLQARIGSLTANQERFMPWRTTDGKEVAKKGLPELHVLIEGVF EKRRFLDLIRDFTVFGETGSGIAKIIAGYHQYHAVRHAVAHTVKAAAPKGDRRAGVIWHTQGSGKSLLMAFYAGQLVRCP ELENPTIVVITDRNDLDDQLFNTFSMCRDLIRQTPIQATNREDLRKALNRASGGVIFTTIQKFTPEKGDSEYPLLTDRRN VVVIADEAHRSQYGFKAKVAQKTGEIAYGFAKYLRDGLPNASFIGFTGTPIEKDDVNTPAVFGHYIDIYDISRAVEDGAT VPLYYESRLARIELSAEEKPKIDEEIEELTEDDAVSEQEALKRKWATVEALVGAEKRLKLIAQDLVRHFEDRVAAMDGKA MVVCMSRRICVALYNEIVALRPAWHSDDDNEGVVKVVMTGSASDPADWQPHVGNKARRELLAKRAKAPKDTLKLVLVRDM WLTGFDAPSMHTMYVDKPMKGHGLMQAIARVNRVFRDKPAGLVVDYIGIGQSLKNALGQYSASDRSQAGIDEGKAVAVMM EKFEIVTAMFHGFDYQRAMTGTAHDRLMVMAEALDWILEQQHKAAEKETDDGKKKEAHRRFQDAVLALSKAFALAAASDE ARSIRDEVAFFQTIRAALTKTGIGGGKTTAEREFAVQQLINRAVASTEIVDILAAAGLNTPDISILSDEFLVEVQQMEKK NLALEALKKLLNGEIHSRTRTNVVETKKFSERLEKAIARYHTNAVSTVEVIQELINLAKDIREARLRGEALGLSQDEIAF YDALAENQSAVDVMGDASLRVIAHELLTSLKGSITVDWAHRESARARMRVLVKRILKRHGYPPDLQDAAIQVVLQQAEAL SAQWAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
