|
Name : DMR_14990 (DMR_14990) Accession : YP_002952876.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : ATP-dependent helicase Function : - COG functional category : S : Function unknown COG ID : COG4951 EC number : - Position : 1652640 - 1655045 bp Length : 2406 bp Strand : + Note : - DNA sequence : TTGTATGTCATGATCACAAGTGGTAGCGACTCTTCTCACACGTCCGAACTTGAGGAGTTGCGAAAGCTACGAGAGGAAAA TGCTCGCCTTAGAGAATTGCTTGCGCGTCACAATATCTCATCGGAAGGATCTTCTGCTACTGAAATTGCGCTATCCCCTG TAGGGCAACGCTCCTTGCCGGTCCCACAAAGTTCTGCAGATAAGATTTCCCTTTTTCGAAAGCTGTTTCGTGGACGAAAT GATGTTTATCCACAGCGTTGGGAGTCCGCCAAGGGGAAGTCAGGATATTCTCCAGTCTGTGAAAATGAATGGCGGCGCGG AGTCTGTCAAAAACCTCGGCTGAAATGCGGGGAATGTAGTCATCGTGTGTTGTTGCCCATAACGGATCAAGTGCTCTATG CTCATCTTTCTGGGAAGTGCACCATCGGTGTGTATCCTCTGTTGTCAGATGATACGTGCTATTTTTTAGCCGCTGATTTT GATGATGATTCTTGGCAAGAGGACTCCAAAGCTTTCATGCAATCTTGTCAGGAACTCAATGTCCCTGCTTACCTGGAAAT ATCTCGATCCGGGAAAGGGGCGCATGTATGGATTTTCTTCCTCGAAGCAGTTTCGGCGCGTGAGGCACGACAACTTGGCG CGGCTTTGATCAGCCATACCTGTGATCGCACACGTCAACTTTCCCTTTCAAGCTACGACCGGTTATTTCCCAATCAAGAT ATCATGCCCAAAGGCGGATTTGGGAATCTGATCGCGTTGCCATTGCAGAAAGTGCCTCGTAATGCTGGGCGCAGTGTCTT TGTTGATGAGAACCTTATTCCTTTTGTTGATCAGTGGGCTCTTCTTGCCTCCGTTCGTCAGATGTCGGCAGCGGAATTAG AGGCCGCTATTTTACGGGCATGTGGCGGTAGACATCCATTGGATGTCGCGTACACATCTGAGGAAAATGATGTATTGCCA TGGCAGAGGCCGAATCGGGAGGTTCGCCAGGTTGCCGGTCCACTTCCTAAATCGTTGGCACTGGTGCTCGCGAACCAGAT TTTTATTTCCAAGTCTGATCTGCCGCAGCAACTCGCAAATCGCCTGATACGGTTGGCCGCTTTCCAAAATCCAGAATTTT ATAAGGCACAGGCAATGCGCCTTCCTGTGTGGGATAAGCCTCGTGTCATTGGTTGTGCTGAGAATTTTCCACAGCATATT GGTCTTCCAAGGGGGTGCCTTGAGTCGGTGCTCGATCTATTACAGAAAAATGGCATCGAACCTCATTTGCAAGAGGAGCG CATCCAGGGGAGTAAAATATCGGTAAAATTTCTTGGGACGCTGAGAAAAGAGCAGATATTGGCTGTTCGCGCGATGCTTC GGCATGACATTGGCGTTTTGTGCGCTCCAACGGCTTTCGGTAAAACAATTACGGCTGCGGCGTTGATTGCTCGGCGAAAG CTTCGCACCCTCGTTTTGGTTCACCGCACGGAATTGTTGAGGCAGTGGTCTGAACGGTTGACGGGATTTCTTAATATCCC AACGGGGGGGATTGGGCTCATTGGAGGAGGAAAGAAAAAGTTCTCAGGTGAAATTGATATCGCAGTTATGCAATCTCTTG TTCGGCAAGATGGCCTTGGCGAATTGCTCGATAATTATGGCCAGATCATCGTCGACGAGTGTCATCATATTTCTGCTTTT TCATTTGAAAGCATACTTAAGCAAGCAAAGTCAAAATACATTGTCGGGTTGACCGCCACTCCGATCAGACGCGATGGCCA GGATCCGATTATTTTTATGCAGTGTGGGCCAATAAGGTACACCGCCGCTCGATCTGAGAATGCACCTTCACGACTTGAAG TATTTCCACGGTTTCTTGCTGCGCCAGATGTTCAAGAGGGGGTGCCTATTCAAGAAGTTTTTCGGAGATTAGTTAGTGAT GGCAAGAGAAATAGATTTATCGTTAAAGATGTTTTGCGTGAATACAAAGAAGGTCGAAAGATTCTTGTTCTCACAGAACG GACAGAGCATTTAGCACTGCTGGCCAGTCTTCTTGAAAATCTTGTTGAAAAATTGTATGTTTTACACGGTAAATTGTCCC GCAAACAGCGAGTGGCTATTTTTTCGGACCTTGAGTCATTAGATGCCTCAACTCCACGAGTAATACTAGCGACTGGCCGT TTGATTGGCGAAGGTTTCGATCATCCACCTCTTGACACGATGATGTTGGCGATGCCGATTTCCTGGAAGGGGACTTTGCA ACAATACGCAGGTCGGCTTCACAGGGAGCATGCTGAAAAGCAAGATGTACGCATTTATGATTATATTGAGGACAATTTAC CTCAATTATCGCGGATGTGGCGCAAACGACAATCGGGATATCAGGCGATGGGCTATCGATTTCGAGACGATCGTAGCTTA GTTTAG Protein sequence : MYVMITSGSDSSHTSELEELRKLREENARLRELLARHNISSEGSSATEIALSPVGQRSLPVPQSSADKISLFRKLFRGRN DVYPQRWESAKGKSGYSPVCENEWRRGVCQKPRLKCGECSHRVLLPITDQVLYAHLSGKCTIGVYPLLSDDTCYFLAADF DDDSWQEDSKAFMQSCQELNVPAYLEISRSGKGAHVWIFFLEAVSAREARQLGAALISHTCDRTRQLSLSSYDRLFPNQD IMPKGGFGNLIALPLQKVPRNAGRSVFVDENLIPFVDQWALLASVRQMSAAELEAAILRACGGRHPLDVAYTSEENDVLP WQRPNREVRQVAGPLPKSLALVLANQIFISKSDLPQQLANRLIRLAAFQNPEFYKAQAMRLPVWDKPRVIGCAENFPQHI GLPRGCLESVLDLLQKNGIEPHLQEERIQGSKISVKFLGTLRKEQILAVRAMLRHDIGVLCAPTAFGKTITAAALIARRK LRTLVLVHRTELLRQWSERLTGFLNIPTGGIGLIGGGKKKFSGEIDIAVMQSLVRQDGLGELLDNYGQIIVDECHHISAF SFESILKQAKSKYIVGLTATPIRRDGQDPIIFMQCGPIRYTAARSENAPSRLEVFPRFLAAPDVQEGVPIQEVFRRLVSD GKRNRFIVKDVLREYKEGRKILVLTERTEHLALLASLLENLVEKLYVLHGKLSRKQRVAIFSDLESLDASTPRVILATGR LIGEGFDHPPLDTMMLAMPISWKGTLQQYAGRLHREHAEKQDVRIYDYIEDNLPQLSRMWRKRQSGYQAMGYRFRDDRSL V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1568 | NP_287072.1 | helicase | Not tested | TAI | Protein | 0.0 | 60 |
| Z1129 | NP_286664.1 | helicase | Not tested | TAI | Protein | 0.0 | 60 |
