Gene Information

Name : DMR_12750 (DMR_12750)
Accession : YP_002952652.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : cation translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1380801 - 1383137 bp
Length : 2337 bp
Strand : -
Note : -

DNA sequence :
ATGCCCCACGATCACACCCATGGCCACGGCCATGACTGCCGCTGCGACGGCCCCAATGCCGGACTGTCCGTCTCCGCGCC
CGGAAACGGGCACGGCCATGCCCATGCGCACGACCACGCCCCCGGACCGCTCCTGGGCCACCTGGACCAGGCTGACATCT
TCCCCTGCTGTTGCGGCGCAGGCTGCGGCGACAGCGCCGCCAAGCCCCAGGCCCCGGCCGATCTGCCGCCGGGCAAAAGC
GTCGACGTGTTTCGCATCGAGGCCATGGACTGCCCCACCGAGGAACGGCTCATCCGCAAAGCCCTCGAACCCATGGCCGG
CGTCAAGGGCCTCGCCTTCAACCTGCTCGGCCGGGAGCTGACCGTCAGCCACGACCTGCCCGCAACCGACGCCATCACCG
CCGCCATCGCCGCCCTGGGCATGGAAGCCGTGCCCGTGGACAAGCGCCGGCCGGCCGGCCCCGAGTCGGCCCCGGTCTGG
ATGACGCCAAAGCTGGCCGTGTCCCTGGCCCTGGCCGTGGCCGCCGAACTCCTTGAATGGCGCGACGTAGCCTCGCCCTG
GCTGCCGGCGGCCTGCGCCATCGCCGCAATTGCGCTCTCCGGCCTGCCGGTCTTTAAAAAGGGCTGGCTGGCCGTGCTGC
GCCGCGACCTCAACATCAACGCGCTTATGAGCGTGGCCGCCGCTGGCGCTCTGCTGCTGGGCCAGTTCCCCGAGGCGGCC
ATGGTCATGGCGCTGTTCGCCGTGGCCGAGAAACTCGAAGCCGCCTCGCTCACCCGGGCCAAGAACGCCGTGGCCGCCCT
GCTCGCCCTGGCTCCCCAGGAAGCCACGGTCATCGGCGACGACGGGTCCGAGGCCGTGGTCGCGGCCGGAGCCGTGCCCA
TCGGGGCCCGGATACGCCTGCGCCCGGGCGAGCGCGTGCCCCTGGACGGCGCGGTCGAGGCCGGCCGGTCGGCCCTGGAC
CAGTCGGCCGTCACCGGCGAGTCCCTGCCCGTGGAAAAAGGCCCGGGCGACCAGCTCTTCGCCGGCACGGTCAACCAGGA
AGGCGAGCTGATCTACCGCACCACCGCCCTGGCCGACGACTCCACCCTGGCCCGCATCACCCGGGCCGTGGTCGCCTCGC
CCGGCAAGAAAGCCCGCACCGAGCGGTTCGTGGACCGCTTCGCCGCCGTCTACACCCCGGCCGTCTTTGCCGTGGCCCTG
GCCGTGGCCGTGTTGCCGCCGCTGGTCGCCGGCGCGTCGTTCACCGACTGGATCTACAAAGGGCTGGTCATCCTGGTCAT
CGCCTGCCCCTGCGCCCTGGTCATCTCCACCCCGGTGTCCATGGTCAGCGGCCTGGCCGCCGCCGCCCGGCGCGGCATCC
TGGTCAAGGGCGGCCTGTTCCTGGAACAAGGCCACGCGCTGACAACCATGGTCCTGGACAAGACCGGCACCCTGACCACC
GGCAAGCCCAGCGCCACCGAAACCTTTGATCTGGCCGGCGACGCCGCCGCCAACCGGGCCGTCGCCGTCAGCCTGGCCGC
CCGCTCGGACCATCCCGTGTCCAAGGCCCTGGCCCGGGCCGGACGCGAGGACGGCGTGGCCGCACTGCCCGTGGCCGACT
TCGCCGCACTGCCCGGACGCGGCGTGCGCGGCGTCGTGGACGGCGTGCCGTACCACCTCGGCAACCACCGGCTCATCGAG
GAACTGGGCCTGTGCGGCCCGGCCATCGAAGCCCGGCTGGAAACCCTGGAAGCCCAGGGGCAAACGGCCGCCCTGCTCGC
CGGCCCGGACATGGTGCTGGCCATCTACGCCGCCGCCGACGTGATAAAGCCCCATAGCCGGGAGGCCGTGGCCGAGCTGC
ACAGCCTGGGCATCCGCACGGTGCTGCTCTCGGGCGACAACAGCCGCACCGCCGCCGTCATCGCGGGCCAAGCCGGCATT
GACGAGGCGCGCGGCGACCAGCTGCCCGAGGACAAGGCCGCCGCCGTTGACGCGCTGACGGCCAAGGGCGACGGCAGCGG
GCTTGTCGGCATGGTCGGCGACGGCATCAACGACGCCCCGGCCCTGGCCCGGGCCGACATCGGCTTCGCCATGGCCGCCG
CCGGCACCGACGCGGCCATCGAAACGGCCGACGTGGCCATCATGGACGACGACCTGCGCAAGGTAGCCGCCTTCGTGCGC
CTGTCCCGGGCCACCGTCTCCACCCTCAAACAGAACATTGCCCTGGCCCTGGGCCTCAAGGGACTGGTGCTGGCGCTGAC
TCTCCTGGGCTACGGCTCCATGCTGCTGGCCGTCTTCGCCGACATGGGCACAAGCTTGCTGGTCATTGCCAATGGTTTGA
GACTATTGAGAAAGTGA

Protein sequence :
MPHDHTHGHGHDCRCDGPNAGLSVSAPGNGHGHAHAHDHAPGPLLGHLDQADIFPCCCGAGCGDSAAKPQAPADLPPGKS
VDVFRIEAMDCPTEERLIRKALEPMAGVKGLAFNLLGRELTVSHDLPATDAITAAIAALGMEAVPVDKRRPAGPESAPVW
MTPKLAVSLALAVAAELLEWRDVASPWLPAACAIAAIALSGLPVFKKGWLAVLRRDLNINALMSVAAAGALLLGQFPEAA
MVMALFAVAEKLEAASLTRAKNAVAALLALAPQEATVIGDDGSEAVVAAGAVPIGARIRLRPGERVPLDGAVEAGRSALD
QSAVTGESLPVEKGPGDQLFAGTVNQEGELIYRTTALADDSTLARITRAVVASPGKKARTERFVDRFAAVYTPAVFAVAL
AVAVLPPLVAGASFTDWIYKGLVILVIACPCALVISTPVSMVSGLAAAARRGILVKGGLFLEQGHALTTMVLDKTGTLTT
GKPSATETFDLAGDAAANRAVAVSLAARSDHPVSKALARAGREDGVAALPVADFAALPGRGVRGVVDGVPYHLGNHRLIE
ELGLCGPAIEARLETLEAQGQTAALLAGPDMVLAIYAAADVIKPHSREAVAELHSLGIRTVLLSGDNSRTAAVIAGQAGI
DEARGDQLPEDKAAAVDALTAKGDGSGLVGMVGDGINDAPALARADIGFAMAAAGTDAAIETADVAIMDDDLRKVAAFVR
LSRATVSTLKQNIALALGLKGLVLALTLLGYGSMLLAVFADMGTSLLVIANGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 3e-136 59
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 2e-79 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_12750 YP_002952652.1 cation translocating P-type ATPase BAC0298 Protein 7e-127 63
DMR_12750 YP_002952652.1 cation translocating P-type ATPase BAC0461 Protein 7e-54 42