Gene Information

Name : GWCH70_3444 (GWCH70_3444)
Accession : YP_002951345.1
Strain :
Genome accession: NC_012794
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 8223 - 11261 bp
Length : 3039 bp
Strand : +
Note : PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mmq:MmarC5_0639 type III restriction enzyme, res subunit

DNA sequence :
TTGGCTTTTGAAGATAGTGAAAAACGATTTGAAGAGGATATAGAAACCTACCTTCTTACGGAAGGCGGGTATGTGAAAGG
CGACCAATCGAATTATGATAAAGAAAGAGCCATTGATCTCAATCAGTTAATTGATTTTATCAAAGAAACACAAGAAAAAG
AATGGACTCGTTATGAAAAAATTTACGGTGAAGAAGCACCAAAAAAATTATATAAGCGTTTAAATGACGAAATCGAAACA
AATGGACTGCTGCATGTGCTTCGTCATGGAATTACTGATCGTGGCGTAAAGCTCAAAATAGCCTCCTTTCGCCCTGAAAC
AACGTTAAATGAAAAAACAATCAGAGATTATCAAGCTAATAAACTGACTGTCATACGTCAATTCGCTTATTCTACAGAAA
ATCATAATACGTTGGATATGGTTTTATCGTTGAATGGGATTCCTATTGTAGCATTGGAGTTAAAGAATCAGTTTAAAGGA
CAGTCCGTTGAAAATGGAAAAAAACAGTTTATGTATGATCGTGACCCAAGAGAAAAAATTTTTCAATTTAACAAACGCAT
ACTAGTTTATTTTGTAGTTGATTTATATGAGGTTTGGATGACCACAAAGTTAGATGGAAAAAACACTGTTTTTTTACCGT
TCAATCAAGGCTCAAACGGTGCGGGAGAAGTAGGAGGGGCTGGAAACCCTGAAAATCCAGACGGTTATGCGACCTCTTAT
TTATGGGAAAAAGTATTGCATAAAGATAGCTTAATGAATATATTGCAGCGATTCATGCATTTAGAAGTAAAAAAAGAAAA
GTTTATCAAAAACGGAAAGGAAAGCGTCAAAACAAGTTCTAAGCTGATTTTCCCACGCTATCATCAGTTAGATGTGGTCA
GAAAACTTGTTGAAGATGTTCGTCAAAAAGGAAGCGGGGAAAATTATCTTATCCAACACAGCGCAGGTTCTGGAAAGTCG
AACAGCATAGCATGGTTGGCATATCATTTAGCAAGTTTGCACAATGAAGATAATGAAAGCATTTTTACATCAGTTATCGT
GGTAACAGATCGAACAGTACTTGATCGGCAATTACAACAAACAATTTCCAGTTTTGATCATACAACAGGGCTTGTAGAAA
CCATTGATGACAAAAAGACTTCCAAAGATTTAAGAGATGCTATTAATAACGGAAAACGAATTATTATCACGACACTTCAA
AAGTTTCCTGTTATTTATGAAGAAGTAGAAGTCAACAAGGGAAGTCGCTTTGCCGTTATTGTAGATGAAGCACATTCCTC
CCAGACAGGAAAAAGTGCGAAAAAATTAAAAGCAGCATTAGCAGATACAGAGGAAGCGTTACGGGAATATGCAGAACTGG
AAGCAGAAATCGAAGCTGAGCAGTTAGATTTTGAAGATGAAATCGTTCAGGAACTTCTGACACATGGCAGACATAAAAAT
TTAAGTTTCTTTGCTTTTACAGCTACTCCTAAAGAAAAGACATTAGAAATGTTTGGGACAAAACAACCAGATGGAACGTT
TAAACCTTTTCATATTTACAGTATGCGTCAAGCTATCGAAGAAGGATTTATATTAGATGTATTACAAAATTATATGACCT
ACAAAACATATTATCGTATTGCCAAAAACACATCAGAGAATCCGGAATTATCGACAACACAGGGAGTAAAAGCTATCAAG
CGTTATCAATCATTACATCCATATACTCTACAACAAAAGACGGCTATCATGGTCGAACAATTTCGGAATGTAACTAGACA
TAAAATTGGCGGTAAAGCAAAAGCAATGGTTGTCACAGCTTCTCGTTTACATGCAGTCCGTTATTTCCATGAGTTTAAGA
AGTATATTAAGGAAAAAGGCTACGATGATATAGATGTGCTGGTAGCTTTTTCAGGCGTTGTTATTGATCAAAATGAAGAA
TACCGAGAAGAAACTTTGAACAAAACAAAAGATGGAAAACGAATTAAAGAAAGTCAATTGAAAGAAGCTTTTCATTCAGA
TGATTTCAATATATTAATTGTTGCGGAGAAATATCAAACAGGATTTGATGAACCATTACTTCATACAATGTTTATCGATA
AGAAATTATCAGGAGTAAAAGCTGTACAAACTTTATCTCGGTTAAACAGGACATATCCCGGAAAAGAGGATACATTTATT
CTGGATTTTGTCAATGAAGCTGAAGATATAAAAAAAGCTTTCCAGCCTTATTATGAAGTAACCGAACTGGATAAAGAGAT
TGATGTAAATCTCATATATGATACGAGAACAAAGCTGAGAAACTTTAAAATTTACAATGATCAAGACATTAAGAAACTAA
CGAGAATTTATTTTAAAAAAGGGAAACAAACAGAAAAGGACTTAGGAAAAATAGCCAGCCACTTAATTCCAATTATTAAA
CGCTATGAAGAACTTGATGAAGAAACACAATATAAATTTCGGGTTACGGTTCGTAACTTTAATAAATGGTATTCATATAT
AACGCAACTCGTCAGAATGTTTGACAAAGAGTTGCATGAAGAGTACATTTTCACATCGTATTTAATTAAGTTTATTCCGA
AAAATAGTGCAGAAAAAATCAATATCGAAGACAAAGTTAAATTAGAGTATTACAAGTTAGAAGAAACATTTAAAGGGACC
ATCACATTAGAATCAAACAGCCCAGAAAATGTACTCAAAAATTCAGATAATGTTGATACAGGCATAAAACCTCCAGATGA
TCAAGACTTATTAGAAAATATTATTCAACGAGTAAACAAAAGATTTGAAGGCAAATTTACAGAAGCTGATCGAGTCATCG
TAGAAGGAATTTACAAAAAAACTGTTAAAGGCAATGAAAAATTAAGGAGATTTGCCAGAAACAATGACGAAGAAATGTTT
AATAAAAGTATCTTTCCTGACGTGTTTGAAAAGGTCGCCCAAGAACTGTATATGGAACAAATGAACGCTTATTCTAAATT
GTTTGAGGATCGATCCTTTTATAATGCAGTAATGGAGGCTGTAGCGAAAGAAGTGTATAAGGAATTGAGACGTGAATGA

Protein sequence :
MAFEDSEKRFEEDIETYLLTEGGYVKGDQSNYDKERAIDLNQLIDFIKETQEKEWTRYEKIYGEEAPKKLYKRLNDEIET
NGLLHVLRHGITDRGVKLKIASFRPETTLNEKTIRDYQANKLTVIRQFAYSTENHNTLDMVLSLNGIPIVALELKNQFKG
QSVENGKKQFMYDRDPREKIFQFNKRILVYFVVDLYEVWMTTKLDGKNTVFLPFNQGSNGAGEVGGAGNPENPDGYATSY
LWEKVLHKDSLMNILQRFMHLEVKKEKFIKNGKESVKTSSKLIFPRYHQLDVVRKLVEDVRQKGSGENYLIQHSAGSGKS
NSIAWLAYHLASLHNEDNESIFTSVIVVTDRTVLDRQLQQTISSFDHTTGLVETIDDKKTSKDLRDAINNGKRIIITTLQ
KFPVIYEEVEVNKGSRFAVIVDEAHSSQTGKSAKKLKAALADTEEALREYAELEAEIEAEQLDFEDEIVQELLTHGRHKN
LSFFAFTATPKEKTLEMFGTKQPDGTFKPFHIYSMRQAIEEGFILDVLQNYMTYKTYYRIAKNTSENPELSTTQGVKAIK
RYQSLHPYTLQQKTAIMVEQFRNVTRHKIGGKAKAMVVTASRLHAVRYFHEFKKYIKEKGYDDIDVLVAFSGVVIDQNEE
YREETLNKTKDGKRIKESQLKEAFHSDDFNILIVAEKYQTGFDEPLLHTMFIDKKLSGVKAVQTLSRLNRTYPGKEDTFI
LDFVNEAEDIKKAFQPYYEVTELDKEIDVNLIYDTRTKLRNFKIYNDQDIKKLTRIYFKKGKQTEKDLGKIASHLIPIIK
RYEELDEETQYKFRVTVRNFNKWYSYITQLVRMFDKELHEEYIFTSYLIKFIPKNSAEKINIEDKVKLEYYKLEETFKGT
ITLESNSPENVLKNSDNVDTGIKPPDDQDLLENIIQRVNKRFEGKFTEADRVIVEGIYKKTVKGNEKLRRFARNNDEEMF
NKSIFPDVFEKVAQELYMEQMNAYSKLFEDRSFYNAVMEAVAKEVYKELRRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0025 YP_042158.1 type I restriction enzyme protein Not tested SCC476 Protein 0.0 60