Gene Information

Name : GWCH70_0889 (GWCH70_0889)
Accession : YP_002949024.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 950861 - 953038 bp
Length : 2178 bp
Strand : -
Note : PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gtn:GTNG_0856 ATP-dependent Clp protease-like (class III stress gene)

DNA sequence :
ATGCTTTGTCAAGTATGCCATCAAAACGAAGCGACGGTATTTGTCAATTTACAATTTAATCATGAGAAAAAGCAAATGCA
CCTTTGCCACGAATGTTATGAAAAACAAAAACAAGAGCTGACTATTCCGATCAATTTCGGTTTCGATAATTTCTCGTCAT
TCCCATTTGATGATTTCTTGATGAACGGATTTTCGCCAATTTCGGAAATGGATACGCCATCAGCAAATATGGCACAACCA
TCCAAACCATCCAAATGGAACAGAAACGGTAAAAGAGGCGGCGGTTTCTTAGACCAATTTGGCCGCAACTTAACACAGCT
TGCGAAAGCCGGTCTGATTGACCCAGTCATCGGACGCGATAAAGAGATTGAACGCGTCATTGAAATTTTAAACCGCCGCA
ATAAAAACAACCCGGTATTAATCGGGGAACCAGGTGTCGGTAAAACAGCGATTGTCGAAGGACTCGCCTTGAAAATCGCT
GAAGGGCAAGTTCCGGAAAAACTATTAAACAAAGAAGTATATTTGCTTGACGTCGCATCGCTTGTTGCGAATACAGGCAT
TCGCGGTCAATTCGAAGAGCGGATGAAACGGCTCATCGCTGAATTGCAGCGCCGGAAAAACGTCATTCTCTTCATCGATG
AAATTCACTTGCTCGTCGGCGCCGGTTCGGCGGAAGGTTCGATGGACGCGGGCAACATTTTAAAACCAGCGCTCGCGCGT
GGAGAATTGCAAGTCGTCGGCGCTACAACGTTGAAAGAATATCGCCAAATTGAAAAAGACGCTGCGCTTGAACGCCGTTT
CCAACCAGTTATCGTGCATGAACCAACGGTCGAAGAAGCGATTACGATTTTAAAAGGGATTCAGCCGAAATACGAGCAAT
TCCATCATGTGAAATATACGGACGAAGCGATTGAAGCGTGCGTCAAATTGTCGCACCGTTACATTCAAGACCGCTTCTTG
CCGGACAAAGCGATCGACTTGTTAGACGAAGCCGGCTCCAAAGCGAACTTGCGCCTCGGTCCGACAGATGAAAAACAAAT
TCAAGAACGCCTTGCGCAAATCGCCAAAGAAAAAGCAAAAGCAGTGAAAGAAGAAAATTTCGAACTGGCAGCGAAATTGC
GCAGCGAAGAGTTGAAATTGGAAAAACAATTGCAAAACGGCGTAAACCAAGAACGCCCAGTTGTCGATGTTGCTGATATC
CAACGCATCATCGAAGAGAAAACAGGCATTCCTGTCGGCAAACTGCAGGCCGATGAAAAAGAAAAAATGAAACATTTAGA
AGAAAACTTAGCGAAAAAAGTCATTGGCCAAGAAGAAGCGGTCAAAAAAGTCGCCAAAGCAATCCGCCGCAGCCGCGCGG
GATTAAAAGCAAAACACCGCCCAATCGGTTCGTTCTTATTCGTTGGTCCGACTGGCGTCGGAAAAACAGAGCTGGCGAAA
ACGTTGGCAGAAGAGCTATTCGGCTCAAAAGACGCAATGATTCGCCTCGACATGAGCGAATACATGGAAAAACATTCAGT
ATCGAAATTAATCGGTTCGCCTCCTGGCTATGTCGGTCACGAAGAAGCCGGCCAGCTTACAGAAAAAGTGCGCCGCAATC
CATACAGCATTATCTTGCTTGACGAGATTGAAAAAGCGCACCCAGATGTGCAACACATTTTCCTTCAAATTTTAGAAGAC
GGCCGTCTCACTGACAGCCAAGGACGCACCGTAAGCTTTAAAGATACAGTCATCATCGCAACAAGCAACGCCGGTGTGAC
AGACAAAAAAATTACGGTCGGATTTGAAAAACAACAAACACAAACAAGCATTCTCGACTCATTAAACGCATACTTCAAAC
CAGAGTTTTTAAACCGTTTCGATGCGATTATTGAATTCAAATCGTTGAAAAAAGAACATATGCTGCAAATTGTTGATCTC
ATGCTTGACGAAGTAAAAGCAGCAATGCGCGAACAACACATCGACCTTGACGTTTCGCAAGCGGCGAAAGAAAAATTAGC
CGAACTCGGCTACCATCCAGCATTCGGCGCTCGTCCGCTCCGCCGCGTCATCCAAGAACATGTCGAAGACAAAATCGCCG
ATGTGCTGCTGGATGAAAACGATCAAGTCAAAGCGATTCGCATCGATGTCGAAAACGATGCGATTGTCGCCAAACCTTTG
CATAAACAAACCGCCTGA

Protein sequence :
MLCQVCHQNEATVFVNLQFNHEKKQMHLCHECYEKQKQELTIPINFGFDNFSSFPFDDFLMNGFSPISEMDTPSANMAQP
SKPSKWNRNGKRGGGFLDQFGRNLTQLAKAGLIDPVIGRDKEIERVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIA
EGQVPEKLLNKEVYLLDVASLVANTGIRGQFEERMKRLIAELQRRKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALAR
GELQVVGATTLKEYRQIEKDAALERRFQPVIVHEPTVEEAITILKGIQPKYEQFHHVKYTDEAIEACVKLSHRYIQDRFL
PDKAIDLLDEAGSKANLRLGPTDEKQIQERLAQIAKEKAKAVKEENFELAAKLRSEELKLEKQLQNGVNQERPVVDVADI
QRIIEEKTGIPVGKLQADEKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAK
TLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILED
GRLTDSQGRTVSFKDTVIIATSNAGVTDKKITVGFEKQQTQTSILDSLNAYFKPEFLNRFDAIIEFKSLKKEHMLQIVDL
MLDEVKAAMREQHIDLDVSQAAKEKLAELGYHPAFGARPLRRVIQEHVEDKIADVLLDENDQVKAIRIDVENDAIVAKPL
HKQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-160 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_0889 YP_002949024.1 ATPase AAA VFG0080 Protein 0.0 65
GWCH70_0889 YP_002949024.1 ATPase AAA VFG0079 Protein 2e-159 55