Gene Information

Name : GWCH70_0601 (GWCH70_0601)
Accession : YP_002948764.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 667079 - 668743 bp
Length : 1665 bp
Strand : +
Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: afl:Aflv_2324 glycosidase

DNA sequence :
GTGAAGAAAGCTTGGTGGAAAGAAGGAGTCGCGTATCAAATTTATCCGAGAAGCTTCATGGATTCAAATGGCGATGGAAT
TGGAGATCTTCGCGGAATTATCGAGAAGCTTGACTATTTAAAAGACCTTGGAATCGATATCATATGGATTTGTCCAATTT
ACAAGTCGCCAAATGCCGATAACGGATATGATATTAGCGATTATCATGCGATTATGGAAGAATTCGGGACAATGGAAGAC
TTTGATTTATTGCTCGAGGAAATTCACCGGCGCGGCATGAAAGTGATTTTAGATTTAGTCATTAACCATACAAGCGATGA
ACACCCATGGTTTATTGAATCGCGTTCATCACGGGATAATCCGAAACGGGATTGGTACATTTGGCGTGATGGAAAAAATG
GCAAAGAGCCGAACAACTGGGAAAGCATCTTTGGCGGATCGGCGTGGGAGTACGATCCGAAAACTGATCAATATTACTTG
CACATATTTGATGTAAAGCAGCCGGATTTAAACTGGGAAAACGAAGAAGTGCGCCAAGCGTTGTATAAAATGATTAATTG
GTGGCTGGATAAAGGAATTGATGGATTTCGAGTGGATGCCATTTCACATATTAAGAAAAAGCCGGGATTGCCGGATTTGC
CGAATCCGAAAGGGCTAGATTATGTTCCGTCTTTTGCTGGCCATATGAACCAAGAAGGGATTATGGATTATTTAAGAGAG
CTCAAAATGCAAACGTTTGCACGCTATGATATTATGACGGTTGGAGAAGCGAATGGCGTTACCGTCGAGGACGCGGAAGA
ATGGGTCGGTGAGGAAAACGGTATTTTCAATATGATCTTCCAGTTTGAACATTTAGGGTTATGGCAAAAAGGAACGAATG
GCGGAGTGGATGTGCGCCAATTAAAGCGTACGTTGACAAAATGGCAAAAAGGGCTGGAAAACCGCGGCTGGAACGCATTG
TTTTTAGAAAACCACGATCAGCCTCGTTCTGTCTCGACATGGGGAAATGATAAGGAGTACCTTACCGAAAGTGCGAAGGC
GCTTGGTGCGATGTACTTTTTGATGCAAGGAACACCGTTTATTTATCAAGGACAGGAGATTGGGATGACGAACGTCCAAT
TTTCGAATATTGAAGACTACAATGATGTTGCTATTAAAAGAATGTATCAAATCGAACGGGAAAAGGGTCGCTCCCATGAA
GAAATTATGAAAGTGATTTGGAAAACAGGGCGCGACAATTCGCGAACCCCAATGCAATGGTCCGACGCGCCAAACGCGGG
GTTTACGACGGGAACGCCATGGATGAAAGTGAACGAAAACTATAAGACCATTAACGTCGAGGCGCAATTGCGCGACCCGA
ACTCCGTCCTTCAGTTTTACAAAAAAATGATTCGGCTTCGCAAGGAGAACGAAGTGTTTATTTATGGAACGTACGATTTG
ATTTTAGAAAAGCATCCGACGATTTATGCGTACACAAGAACGCTTGGAAACGAAAAAGCGATGGTTATTGTCAATTTAAG
CGACAAGCCAGCGCTGTATCGATATGATGGCATTCGATTAAGCTCAGAAAATTTGGTGCTGCAAAACTATGATGTAAAAC
CGCATAAAAACGCAACACGCTTTAAGCTGAAACCGTATGAAGCACGCGTATATTTGCTGAAATAG

Protein sequence :
MKKAWWKEGVAYQIYPRSFMDSNGDGIGDLRGIIEKLDYLKDLGIDIIWICPIYKSPNADNGYDISDYHAIMEEFGTMED
FDLLLEEIHRRGMKVILDLVINHTSDEHPWFIESRSSRDNPKRDWYIWRDGKNGKEPNNWESIFGGSAWEYDPKTDQYYL
HIFDVKQPDLNWENEEVRQALYKMINWWLDKGIDGFRVDAISHIKKKPGLPDLPNPKGLDYVPSFAGHMNQEGIMDYLRE
LKMQTFARYDIMTVGEANGVTVEDAEEWVGEENGIFNMIFQFEHLGLWQKGTNGGVDVRQLKRTLTKWQKGLENRGWNAL
FLENHDQPRSVSTWGNDKEYLTESAKALGAMYFLMQGTPFIYQGQEIGMTNVQFSNIEDYNDVAIKRMYQIEREKGRSHE
EIMKVIWKTGRDNSRTPMQWSDAPNAGFTTGTPWMKVNENYKTINVEAQLRDPNSVLQFYKKMIRLRKENEVFIYGTYDL
ILEKHPTIYAYTRTLGNEKAMVIVNLSDKPALYRYDGIRLSSENLVLQNYDVKPHKNATRFKLKPYEARVYLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-133 50