Gene Information

Name : GWCH70_0323 (GWCH70_0323)
Accession : YP_002948516.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Resistance
Product : spermidine/putrescine ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 373436 - 374509 bp
Length : 1074 bp
Strand : +
Note : KEGG: gka:GK0723 spermidine/putrescine ABC transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA

DNA sequence : 
ATGGAGAAAGAGGCGATCATCCGCTTTGAGCGGGTGACGAAGGAATACGATGGGTTAGTCGTGCTCGATGATGTCAGTTT
TGAGATTGAGCGCGGGAAGTTTTATACCTTGCTCGGGCCGTCGGGATGCGGGAAGACGACGATTCTGCGTTTGATCGCGG
GGTTTACGGAGCCGACGGAAGGAACGATTTATTTTCACGGAAAGCCGGTAAATCATGTACCTGCGAATAAGCGGCAAGTG
AATACGGTGTTTCAGGATTATGCTTTGTTTCCGCATTTGAACGTGTTTGAAAACGTGGCGTTTGGGTTGCGGATTAAAAA
GAAAAAGCGCTCGGAAATTGAGGAAAAAGTAAAGCAGGCGCTTCGGTTTGTGAATTTAGAAGGATACGAGAATCGCAGTA
TTCAAGAAATGTCCGGAGGCCAGCGGCAGCGAGTGGCGATTGCGCGCGCGATTGTCAACGAACCAGAAGTGCTTCTGCTT
GATGAGCCGCTGTCGGCGCTTGATTTAAAGCTGCGCACGGAAATGCAATATGAGCTTCGCGAACTGCAGCGAAGCTTAGG
GATTACGTTTATTTTTGTCACACATGACCAAGAAGAGGCGCTGGCGATGTCGGACCAAATTTTCGTGCTCAATAAGGGGA
AAATCCAGCAAAGCGGCACACCGAAAGACATTTACGATGAGCCGATTAATCGGTTTGTCGCTGATTTTATCGGTGAATCG
AACATCTTGCGAGGCACGATGATTGAAGATTACCTTGTCGAATTCGCTGGGAAGCGGTTTACGTGCGTGGACAAAGGATT
TCGCCCGAACGAGCCAGTCGATATTGTCATCCGTCCGGAAGATTTGGACATTACGACAAAAGATCAAGGAAAGCTCCAAG
TGCGCGTCGATTCGCTATTGTTCCGAGGTGTACATTACGAGTTGTGCTGCTATGACGAAGATGGGAATGAATGGCTCGTC
CATTCGACGAAAAAAGCGGAAGTAGGAGAAGAAATCGGGCTTTATTTTGACCCAGAGGACATTCATGTCATGCGCATCAG
CGAAGATGATGGTGAGAGATCCGATGAAAAATAG

Protein sequence : 
MEKEAIIRFERVTKEYDGLVVLDDVSFEIERGKFYTLLGPSGCGKTTILRLIAGFTEPTEGTIYFHGKPVNHVPANKRQV
NTVFQDYALFPHLNVFENVAFGLRIKKKKRSEIEEKVKQALRFVNLEGYENRSIQEMSGGQRQRVAIARAIVNEPEVLLL
DEPLSALDLKLRTEMQYELRELQRSLGITFIFVTHDQEEALAMSDQIFVLNKGKIQQSGTPKDIYDEPINRFVADFIGES
NILRGTMIEDYLVEFAGKRFTCVDKGFRPNEPVDIVIRPEDLDITTKDQGKLQVRVDSLLFRGVHYELCCYDEDGNEWLV
HSTKKAEVGEEIGLYFDPEDIHVMRISEDDGERSDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-28 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_0323 YP_002948516.1 spermidine/putrescine ABC transporter ATPase BAC0604 Protein 1e-31 41