Gene Information

Name : GWCH70_3409 (GWCH70_3409)
Accession : YP_002951312.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3440769 - 3441479 bp
Length : 711 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gka:GK3474 two-component response regulator

DNA sequence :
ATGATGGAAAAACGAATTCTCGTTGTTGATGATGAGAAGCCGATTGCGGATATTTTGCAATTTAATTTGCAAAAAGAAGG
ATATGAGGTAATTTGTGCTTACGATGGAGAAGAAGCGTTACAAAAAGTGGAAGAAGTAATGCCAGATCTTATTTTGCTTG
ATATTATGCTTCCACAAAAAGACGGTATGGAAGTTTGTCGGGAAGTACGGAAAAAATACGATATGCCAATTATTATGTTA
ACTGCAAAAGATTCAGAGATTGATAAGGTACTTGGTTTAGAATTAGGGGCGGACGACTATGTAACAAAGCCGTTCAGTAC
GAGAGAGCTGTTAGCGCGGGTAAGAGCGAATTTACGCCGTCATACACAAATTGTTGCACAGGAAGAAACGAACGATACGA
ATGAAATTATTATCGGTTCTCTTGTCATTCGTCCTGATGCATACATCGTTTCGAAACGAGGAGAAACGATTGAATTAACG
CATCGCGAGTTTGAATTGCTGCATTATTTGGCAAAACATATTGGACAAGTCATGACAAGGGAGCACCTGTTGCAAACCGT
ATGGGGATACGATTATTACGGTGATGTTCGTACTGTTGATGTCACGGTGCGCCGTCTCCGCGAAAAAATTGAAGATAATC
CATCACACCCTTCATGGATTGTCACACGACGGGGAGTCGGATATTATTTGCGCAACCCAGAACAGGAGTAA

Protein sequence :
MMEKRILVVDDEKPIADILQFNLQKEGYEVICAYDGEEALQKVEEVMPDLILLDIMLPQKDGMEVCREVRKKYDMPIIML
TAKDSEIDKVLGLELGADDYVTKPFSTRELLARVRANLRRHTQIVAQEETNDTNEIIIGSLVIRPDAYIVSKRGETIELT
HREFELLHYLAKHIGQVMTREHLLQTVWGYDYYGDVRTVDVTVRRLREKIEDNPSHPSWIVTRRGVGYYLRNPEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-32 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-61 66
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-54 57
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 6e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 7e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 8e-55 56
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 3e-41 51
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-45 51
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-39 47
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-43 46
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 2e-36 46
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 3e-30 45
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 5e-39 45
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 2e-30 45
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 3e-34 44
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 3e-34 44
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 3e-38 44
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 9e-36 44
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-35 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 5e-30 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator BAC0125 Protein 1e-28 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP001485.1.gene721.p Protein 2e-30 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator BAC0533 Protein 2e-33 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 5e-36 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 2e-33 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 5e-36 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator DQ212986.1.gene4.p01 Protein 3e-38 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 2e-33 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator BAC0308 Protein 2e-23 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AF130997.1.orf0.gene Protein 2e-35 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator EU250284.1.orf4.gene Protein 6e-37 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 2e-34 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-26 43
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-32 42
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-32 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-32 41
GWCH70_3409 YP_002951312.1 winged helix family two component transcriptional regulator VFG1386 Protein 3e-30 41