Gene Information

Name : GWCH70_3402 (GWCH70_3402)
Accession : YP_002951305.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 3433850 - 3434329 bp
Length : 480 bp
Strand : -
Note : PFAM: protein of unknown function DUF163; KEGG: gka:GK3467 hypothetical protein

DNA sequence :
GTGCATATTCACATTATTTCTGTTGGTAAGTTAAAAGAAAAATATTTGATGCAAGGGATTGACGAATATAAAAAACGATT
ATCCAGTTATGCGAAAGTTGATATCATTGAAGTTCCTGATGAAAAAGCGCCAGAACATTTAAGTGAACAAGAAATGGAGC
AAATTAAACAGCGGGAAGGGGAACGCATTTTAGCGAAAATTCCCAATGACGCGTATGTGATTGCCTTAGCGATCGAAGGA
AAGATGAAATCGTCCGAGCAATTTGCCGCCAGCCTAGACAAACTTGCCACTTACGGAAAAAGCAAAATCGCCTTTATCAT
CGGCGGTTCGCTCGGCTTAAGCAAACAAGTGATGCAGCGCGCCGATGAAGCGTTATCGTTTTCCAAAATGACGTTCCCGC
ACCAGCTGATGCGTCTCATTCTCCTTGAACAAATTTACCGTGCGTTTCGGATTAACCGGGGGGAGCCGTATCATAAATAA

Protein sequence :
MHIHIISVGKLKEKYLMQGIDEYKKRLSSYAKVDIIEVPDEKAPEHLSEQEMEQIKQREGERILAKIPNDAYVIALAIEG
KMKSSEQFAASLDKLATYGKSKIAFIIGGSLGLSKQVMQRADEALSFSKMTFPHQLMRLILLEQIYRAFRINRGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-47 63
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-47 63
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-47 63
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-47 63
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-47 63
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-47 63
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-47 63
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-47 63
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-47 63
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-47 63
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-47 63
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-47 63
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-46 62
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-47 62
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-29 61
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-45 61
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-45 61
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-46 61
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 7e-41 59