Gene Information

Name : GWCH70_3274 (GWCH70_3274)
Accession : YP_002951180.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 3303360 - 3304058 bp
Length : 699 bp
Strand : -
Note : TIGRFAM: capsular exopolysaccharide family; KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein

DNA sequence : 
TTGGCTCGTAGAGATCGGAAAAAAATACAAAAAATAGAGCGAAGTTTAATTACGATGGAAGACCCGAAATCGCCAATTTC
GGAACAATACCGGACGATTCGGACGAACGTGCAATTCTCGTTTGTCGACAAAACGATGCGTTCTATAATGATCACTTCGG
CAGGTCCTGGGGAAGGAAAATCAACGACGACAGTAAACTTAGCGATCGTCTTCGCTCAACAAGGAAAAAAAGTGTTATTA
ATTGACGCGGACTTACGCAAGCCGACGGTGCATTACACGTTTCGCTTAAACAACTATATGGGGTTAACCAACGTACTAAC
CAACTCCGCACCGTTATTGCCGTCATGTCAAGAAACAAGTGTAGAAAATTTATATGTTCTTACATCCGGTCCCATTCCGC
CAAATCCAGCGGAGCTTCTGAGCTCTAAAGCGATGGAACAATGCATACAACAACTGTATAATGAATTCGACTTGCTCATT
TTTGACACGCCGCCGGTGTTGGCGGTGACGGACGCGCAAATTTTAGCGAATCAATGCGACGGGACAATATTGGTCATCGA
AAGCGGCGGAACGGAAATCGAGGCTGCCGTAAAAGCGAAGGAACTATTGGAAGCGGCCAACGCGAAACTGCTTGGCGTTG
TGCTGAACAAACGGAAACACCGCGAAGGCGGCTACTACTATTACTATCGATATAAATAA

Protein sequence : 
MARRDRKKIQKIERSLITMEDPKSPISEQYRTIRTNVQFSFVDKTMRSIMITSAGPGEGKSTTTVNLAIVFAQQGKKVLL
IDADLRKPTVHYTFRLNNYMGLTNVLTNSAPLLPSCQETSVENLYVLTSGPIPPNPAELLSSKAMEQCIQQLYNEFDLLI
FDTPPVLAVTDAQILANQCDGTILVIESGGTEIEAAVKAKELLEAANAKLLGVVLNKRKHREGGYYYYYRYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-32 45
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 8e-32 45
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_3274 YP_002951180.1 capsular polysaccharide biosynthesis protein VFG1349 Protein 7e-21 47
GWCH70_3274 YP_002951180.1 capsular polysaccharide biosynthesis protein VFG1298 Protein 8e-31 42
GWCH70_3274 YP_002951180.1 capsular polysaccharide biosynthesis protein VFG1368 Protein 3e-23 42