Gene Information

Name : GWCH70_0243 (GWCH70_0243)
Accession : YP_002948439.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 269284 - 269982 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gka:GK0312 lantibiotic ABC transporter ATP-binding protein

DNA sequence :
ATGGAAGAATATATTTTGCAAACCAATAAATTAAGTAAATCTTTTGGTAAACAGTTAGCAGTAGACAATGTTTCTTTAAA
AGTAAAAACAAACACCATCTACGGACTGCTTGGACCAAACGGAGCCGGCAAATCAACGACTTTAAAACTGTTAACAGGGC
TTTTACATCCTACATCTGGCGAAATTATATTTAACGGTCATCCATGGAGCAGAAAAGACCTTAAAGACATAGGTGTACTT
ATTGAATCACCGGCTCTTTATGGCAATTTGACCGCTTATGAGAATCTTCTCGTTCACACAAAAGTATTACATTTACCAGA
ATCAAGAATACAAGAAGTGTTGAAAATAGTTGGTTTAGAAAACACCGGGAAAAAGAAAGTATCGCAATTTTCTTTCGGTA
TGAAGCAAAGATTAGGCATTGCCAAAGCACTTTTAAATCATCCCAAGCTTCTTATTCTCGATGAGCCAACAAACGGACTT
GATCCACTAGGTATACAAGAATTGCGCAAGCTTATAAGATCCTTCCCGTCACAAGGAATGACTGTCATTTTATCAAGTCA
TATTTTATCAGAAGTAGCACAATTGGCAGACCACATTGGCATCATTCATCATGGAAAACTCAAATATCAAGGTGAAATAG
AGAAAAACAAAGATTTAGAAAAACTGTTTATGGATGTAGTCAGTGAAAAAGCGAAATAG

Protein sequence :
MEEYILQTNKLSKSFGKQLAVDNVSLKVKTNTIYGLLGPNGAGKSTTLKLLTGLLHPTSGEIIFNGHPWSRKDLKDIGVL
IESPALYGNLTAYENLLVHTKVLHLPESRIQEVLKIVGLENTGKKKVSQFSFGMKQRLGIAKALLNHPKLLILDEPTNGL
DPLGIQELRKLIRSFPSQGMTVILSSHILSEVAQLADHIGIIHHGKLKYQGEIEKNKDLEKLFMDVVSEKAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 8e-46 57
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-41 53
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-35 50
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-35 50
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-35 50
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-35 50
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-36 48
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-36 48
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-34 45
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 8e-35 45
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 2e-26 42
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 2e-25 41
glrA YP_004287007.1 spermidine/putrescine import ATP-binding protein potA Not tested Not named Protein 1e-19 41