Gene Information

Name : GWCH70_2675 (GWCH70_2675)
Accession : YP_002950634.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2707269 - 2707973 bp
Length : 705 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: afl:Aflv_0508 DNA-binding response regulator, OmpR family (REC-wHTH domains)

DNA sequence :
ATGTGTAAAAAAGTATTAGTCGTTGATGATGAGCAATCGATTGTCACACTTTTAACATACAATTTGGAACAAGCGGGTTT
TACGGTTTTGACCGCAAATGACGGCGAGGAAGCAATAGAAAAGGTAGCTTTCGAACAGCCAGCATTTATTATTCTTGATT
TGATGCTGCCAAAGCTCGATGGGGTGGAAGTATGTAAACAATTGCGCCAGCAAAAAGTGATGACACCGATTTTAATGTTA
ACGGCGAAAGATGATGAATTTGATAAAGTGCTTGGGCTTGAACTCGGCGCTGATGATTATATGACAAAGCCGTTTAGTCC
GCGTGAAGTAGTAGCGAGAGTAAAAGCGATTTTGCGGCGCACGCAGCTTTCTAATGGAGAAATGGAAACAAAAGAAATAG
TCATCGGAGATTTAAAGATTCTTCCTGACAGCTATGAGGCATATTTTCGTGGGGAGCGGCTTGAGCTGACTCCAAAAGAA
TTTGAACTGCTTGTTTATTTAGCAAAACATAAAGGTCGAGTATTAACGAGGGATCAACTGCTAAGTTCGGTATGGAACTA
TGATTTTGCTGGGGATACTCGTATTGTCGATGTTCACATCAGCCATTTGCGTGAAAAAATTGAACAAGATACAAAAAAAC
CTATATATATTAAAACAATAAGAGGGCTTGGATATAAACTAGAGGGGCCAAAGCGGAATGACTAG

Protein sequence :
MCKKVLVVDDEQSIVTLLTYNLEQAGFTVLTANDGEEAIEKVAFEQPAFIILDLMLPKLDGVEVCKQLRQQKVMTPILML
TAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRRTQLSNGEMETKEIVIGDLKILPDSYEAYFRGERLELTPKE
FELLVYLAKHKGRVLTRDQLLSSVWNYDFAGDTRIVDVHISHLREKIEQDTKKPIYIKTIRGLGYKLEGPKRND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-35 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 9e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 9e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 7e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 8e-76 69
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-73 67
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 2e-66 57
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 4e-55 56
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-60 55
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 1e-40 46
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 4e-36 44
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 2e-32 44
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP001485.1.gene721.p Protein 8e-38 44
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 6e-37 44
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0197 Protein 4e-31 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 3e-42 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 3e-35 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 2e-36 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 3e-35 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0533 Protein 2e-36 43
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 3e-40 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator EU250284.1.orf4.gene Protein 2e-40 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 2e-36 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-32 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 3e-40 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 2e-39 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 6e-36 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 2e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 2e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 5e-36 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-29 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 8e-40 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP004022.1.gene1676. Protein 5e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 1e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0039 Protein 2e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator BAC0596 Protein 3e-34 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 2e-35 41
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-33 45
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-38 42
GWCH70_2675 YP_002950634.1 winged helix family two component transcriptional regulator VFG1386 Protein 6e-41 42