Gene Information

Name : rph (GWCH70_2600)
Accession : YP_002950561.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2634435 - 2635202 bp
Length : 768 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGGATAGATGGCAGAGAAAACAAACAGCTGCGTCCTGTACATATGGAGAAACATTTTATTAAACATGCAGAAGGGTC
GGTATTCATTACAGTTGGTGATACGAAAGTGATTTGCACAGCAAGCATCGATGACAAAGTGCCGCCGTTTATGCGTGGCG
GCGGAAAAGGATGGATTACTGCGGAATATGCGATGCTGCCGAGAGCGACAGAACAGCGAAATGTGAGGGAATCTAGCAAA
GGAAAATTATCAGGGCGAACAATGGAAATCCAACGTCTTATCGGAAGAGCGCTTCGTTCTGTCGTTAATTTGGACAAGTT
AGGCGAGAAGACGGTATGGATTGATTGTGATGTGATTCAAGCGGACGGAGGAACGCGGACAGCGTCGATTACAGGAGCGT
ATGTAGCGATGGTGTTAGCATTCGCGAAATTGATGGAAGAAAAGAAACTCGATGAACTTCCTGTGAATGATTTTCTAGCT
GCTACATCTGTTGGGATCGATCCAGAACACGGAATTATTCTTGATTTAAACTATGCGGAAGACGCGCGGGCAGAAGTCGA
TATGAACATTGTGATGACAGGAGCTGGCCGCTTTGTGGAAATTCAAGGAACAGGAGAAGAAGCGACATTTTCGCGAGAAC
AATTAAATGAATTGCTAGATACAGCAGAAGTAGGAATTCGACAGCTTATCGACATTCAACGGAAAACGTTAGGAGAACTT
GCAATGCAAATTGATATAAAGAGAAGCGAGGAAAGTGGGGATACATGA

Protein sequence :
MRIDGRENKQLRPVHMEKHFIKHAEGSVFITVGDTKVICTASIDDKVPPFMRGGGKGWITAEYAMLPRATEQRNVRESSK
GKLSGRTMEIQRLIGRALRSVVNLDKLGEKTVWIDCDVIQADGGTRTASITGAYVAMVLAFAKLMEEKKLDELPVNDFLA
ATSVGIDPEHGIILDLNYAEDARAEVDMNIVMTGAGRFVEIQGTGEEATFSREQLNELLDTAEVGIRQLIDIQRKTLGEL
AMQIDIKRSEESGDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-60 57