Gene Information

Name : GWCH70_0213 (GWCH70_0213)
Accession : YP_002948410.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : RNA binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 230837 - 233023 bp
Length : 2187 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: gtn:GTNG_0209 S1 RNA binding domain protein

DNA sequence :
TTGTTAAATAGAGAAGCGTTGATGGACCTGATAGCGAATGAATTACATTTGTCCACAAAGCAAGTTAGCAATGTGATTTC
TCTTTCTGAGGAAGGAAATACGGTGCCGTTTATTGCCCGCTATCGGAAAGAGATGACAGGCGCCTTAGATGAAGTGCAAA
TTCGTGATATTTTGGAGAAATGGAATTACCTACAAAACTTAGAACAGCGGAAAGAAGAAGTCCTTCGCCTTATTGATGAA
CAAGGAAAACTAACGGATGATCTAAAAAACGCGATCATCAATGCTACGAAACTGCAGCAAGTGGAAGATTTGTATCGTCC
TTATAGACAAAAACGACGTACAAAAGCCACCATTGCTAAGGAAAAAGGGTTAGAGCCTCTTGCGGAATGGTTATGGACGT
GTCCAATGAGGCCGCGGCCGGAAGAAAAAGCGCAAGAGTTTATTCAACCAGAAAAAGAAGTACGTACCGTTGAAGAGGCG
CTTCAAGGTGCGAAAGACATCATCGCTGAAAAGGTATCGGATGATGCACAATTTCGCCAATGGATTCGCCAGCACACATG
GAAAAAAGGCGTGATCATATCGACTGTCAAAGAGTCGGAAAATGATGAGAAAAAAGTATATGAAATGTATTACGAATATG
AAGAGCCAGTACATAGGATTGTTCCGCATCGTGTATTAGCGCTCAATCGCGGCGAAAAAGAAGGAGTGTTGCGTGTTTCC
ATTCAGGCGCCGGTAGAAGATATTATGACATACTTACAAAAGCACATTATTACAAATCCGCAATCTCCCGCCGCTTCCCT
CCTTTCTGAAGCGATTGAGGACGGCTACAAAAGGCTTATTGAACCGTCAATCGAGCGGGATATTCGCAATGAATTAACCG
AAAAAGCGGAAGAGCGGGCGATTCATATTTTTGCGGAGAACTTACGCAAGCTATTGCTTCAGCCGCCGTTAAAAGGGAAG
ATTGTTCTTGGTATAGATCCTGCCTATCGAACGGGATGCAAGCTGGCGGTGGTCGACGAAACAGGCAAATTGCTGAAAAT
CGATGTCATTTACCCTCATCCCCCGCAGCAACAGATAGAAGAAGCGAGAGAAAAGTTAATCCGCATTATCGAAGAATATC
ATGTCGAAATGATTGCCATTGGGAACGGAACTGCATCAAGGGAAACGGAGCAATTTGTGGCGGACACCTTAAAACAAGTA
GATAAAGAAATTTTTTACCTTATTGTCAATGAAGCGGGAGCGAGCGTCTATTCCGCCTCTGACCTTGCCCGTCAAGAGTT
TCCAGATTTACAGGTAGAAGAACGGAGCGCAGTTTCGATCGCAAGGCGTGTACAAGACCCGCTTGCCGAACTGGTGAAAA
TTGATCCAAAATCAGTAGGAGTTGGCCAATATCAGCACGACGTTTCACAAAAAAAATTAGCGCAATCATTGCAGTTTGTC
GTGGAAACCGTTGTTAACCAAGTTGGCGTCAACGTCAACACTGCCTCCGTCTCTTTATTGCAATACGTATCAGGGCTTAC
GAAAACAGTATCGGAAAATATCGTAAAACGCCGTGAGGAACAAGGAAAATTTAAAAACCGCGAGGAATTAAAATCGATAC
CGCGGCTTGGTGCTAAAACATATGAACAGTGTATCGGATTTTTACGCATTATTGATGGAGACGAACCGCTCGACCGTACG
CCGATTCATCCTGAGCGGTATGAAGAAGTGAAAAGGCTGTTGCACCAAATTGGTTTTACAACTGAACATATCGGAAGTGA
AGAGCTTCGTCAGGCATTGCAATCTCTTTCCATTCCTGACACGGCTGCTGAACTTGGCATCGGAGAATTGACATTACAAG
ACATTATCGACGCTTTAATTCGTCCAGAACGTGATCCTCGCGATGAGCTGCCAAAGCCGTTATTACGAAAAGACATTTTA
AAAATGGAAGATTTAAAAAGGGGAATGGAGTTAGAAGGAACGGTGCGGAACGTCGTCGATTTCGGAGCGTTTGTGGATAT
TGGGGTTAAGCAGGATGGGCTTGTTCACATTTCAAAATTAAGCAAGCAATATGTACGTCATCCGCTTGACGTTGTATCAG
TAGGCGATGTGGTAAAAGTTTGGGTTGACAATGTAGATCTCGATAAAGGAAGAATTTCTTTATCTATGATTCCACCGGAA
GAATCAGAAAAAACACTGCTTTCATGA

Protein sequence :
MLNREALMDLIANELHLSTKQVSNVISLSEEGNTVPFIARYRKEMTGALDEVQIRDILEKWNYLQNLEQRKEEVLRLIDE
QGKLTDDLKNAIINATKLQQVEDLYRPYRQKRRTKATIAKEKGLEPLAEWLWTCPMRPRPEEKAQEFIQPEKEVRTVEEA
LQGAKDIIAEKVSDDAQFRQWIRQHTWKKGVIISTVKESENDEKKVYEMYYEYEEPVHRIVPHRVLALNRGEKEGVLRVS
IQAPVEDIMTYLQKHIITNPQSPAASLLSEAIEDGYKRLIEPSIERDIRNELTEKAEERAIHIFAENLRKLLLQPPLKGK
IVLGIDPAYRTGCKLAVVDETGKLLKIDVIYPHPPQQQIEEAREKLIRIIEEYHVEMIAIGNGTASRETEQFVADTLKQV
DKEIFYLIVNEAGASVYSASDLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHDVSQKKLAQSLQFV
VETVVNQVGVNVNTASVSLLQYVSGLTKTVSENIVKRREEQGKFKNREELKSIPRLGAKTYEQCIGFLRIIDGDEPLDRT
PIHPERYEEVKRLLHQIGFTTEHIGSEELRQALQSLSIPDTAAELGIGELTLQDIIDALIRPERDPRDELPKPLLRKDIL
KMEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQYVRHPLDVVSVGDVVKVWVDNVDLDKGRISLSMIPPE
ESEKTLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-118 44