Gene Information

Name : GWCH70_2239 (GWCH70_2239)
Accession : YP_002950213.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 3.5.4.26
Position : 2292233 - 2293318 bp
Length : 1086 bp
Strand : -
Note : KEGG: gtn:GTNG_2225 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGCGAAACGATGAACAGTATATGCGCCTAGCAATCGAAATCGCCAAAGCAGGAATTGGACAAACGTCTCCTAATCCGGT
TGTCGGCGCTGTTGTGGTGAAAGATGGAGAAATTGTCGGATTTGGCGCCCATTTGAAAGCAGGGGAGCTGCACGCGGAGG
TACATGCCATCCGTATGGCGGGAGAAAAAGCGAAAGGATCTACCGTTTATGTAACGCTGGAGCCGTGCAGTCATTATGGG
AAAACGCCCCCTTGCGCCGATTTATTAGTGGAAACAGGTGTTCAACGCGTTGTCATTGCAACGACAGATCCGAACCCGCT
CGTAGCCGGTAAAGGCATCGAAAAACTAAGGAGTGCGGGAATTGACGTGAAGCTTGGGGTGCTGAAAGAGGAAGCGGATG
AGTTAAACCGCGTGTTTTTCCACTACATTGCGGCGAAAACGCCGTTTGTGACGCTAAAATATGCAAGCAGTCTTGATGGA
AAAATTGCAACGACAACCGGAGAAAGCAAATGGATTACATCCGAAGCGGCCCGGGAAGATGTGCATCGCTATCGGGCGGT
GCATGATGCGATTCTTGTTGGGGTAAACACCGTTATTGCGGATAATCCAAGTTTAACCGTAAGGCTTCCCGAAGGTGGAA
AAAATCCGATACGCATCGTTTTAGATACGCATTTGCGCACGCCGCTTGATGCAAACATTCTCAATGATGGCCAAGCGGAA
ACGTGGATTGTTGTCGGCAGTGAAATCAGCGTTGAAAAAAGGAAGCGGTATGAGAAAGAAAATGTACAAATTATTTCCAT
GAAAAAGCCGCATATTGATATAGATGAATTGCTGCGCGTACTTGGTGAGAAACGAATTACTTCCCTTTTTGTTGAAGGCG
GATCACACGTGCATGATAGTTTCGTGCGCGCCAAGGCAGTTAATGAAATCGTCGCATACTTTGCTCCGAAGATCATTGGC
GGAAAACAAGCGCCAACGCCAATAGGGGGAATTGGTTTTGCCGGCATGGCTGACGTTATGCAGCTAGAAATTCGGCGAGT
AGAGACGATCGGGCCAGATATAAAAATCGTCGCAATACCAAAATAA

Protein sequence :
MRNDEQYMRLAIEIAKAGIGQTSPNPVVGAVVVKDGEIVGFGAHLKAGELHAEVHAIRMAGEKAKGSTVYVTLEPCSHYG
KTPPCADLLVETGVQRVVIATTDPNPLVAGKGIEKLRSAGIDVKLGVLKEEADELNRVFFHYIAAKTPFVTLKYASSLDG
KIATTTGESKWITSEAAREDVHRYRAVHDAILVGVNTVIADNPSLTVRLPEGGKNPIRIVLDTHLRTPLDANILNDGQAE
TWIVVGSEISVEKRKRYEKENVQIISMKKPHIDIDELLRVLGEKRITSLFVEGGSHVHDSFVRAKAVNEIVAYFAPKIIG
GKQAPTPIGGIGFAGMADVMQLEIRRVETIGPDIKIVAIPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-57 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-57 41