Gene Information

Name : GWCH70_1984 (GWCH70_1984)
Accession : YP_002949981.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2044269 - 2045084 bp
Length : 816 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_1320 iron(III) dicitrate transport ATP-binding protein

DNA sequence : 
ATGAACGCCTTACAAGCAAAGGAGCTAACGTTATCATATGGAAACACGATCATTATTGATGAATTAGATTTAATGATTCC
AAAAGGAGAAATTACTGTATTTATTGGTGGAAATGGCAGCGGCAAATCGACGTTATTGCGCGCTTTAGCACGGCTTTTGA
AACCGGCGGGCGGTGCGGTTTTGCTGGAAGGAAAGGAAATCGCGAAATTGCCGACCAAAGACGTGGCGAAAAAGCTAGCG
ATATTGCCGCAATCACCAACTGCTCCGGAAGGGTTGACGGTGCTGCAGCTTGTTAAGCAAGGGAGATATCCGTACCAAAC
GTGGCTGAAACAATGGAGCGAAGAAGATGAAAAAGCGGTGCGGCGTGCGCTCGAAGCAACGAGGATGACAGAATTAGCGG
AGCGTCCGGTCGATTCGCTTTCAGGGGGACAGCGGCAGCGGGCTTGGATTGCGATGACGCTGGCGCAGGATACGGACATT
ATTTTATTGGACGAACCGACGACGTATTTGGATATGACGCACCAAATTGAAATTCTTGATTTATTGTTTGAGTTAAACGA
GAAGGAAAAGCGCACGATTGTCATGGTGCTTCACGACTTAAACTTGGCTTGCCGCTACGCTCACCATATTGTGGCGATTC
GCGATAAAAAAATATATGCGCAAGGAAAACCGGAAGAAATCATTTCCTGTCAATTGGTGAAAGACGTATTTCAAATGGAT
TGTCAAGTGACATATGATCCGCTATTTGGAACTCCACTTTGCATTCCATATGGAAAAGGAAGATGCATTCTACAGAAAGA
AGGCGTTTCATCATGA

Protein sequence : 
MNALQAKELTLSYGNTIIIDELDLMIPKGEITVFIGGNGSGKSTLLRALARLLKPAGGAVLLEGKEIAKLPTKDVAKKLA
ILPQSPTAPEGLTVLQLVKQGRYPYQTWLKQWSEEDEKAVRRALEATRMTELAERPVDSLSGGQRQRAWIAMTLAQDTDI
ILLDEPTTYLDMTHQIEILDLLFELNEKEKRTIVMVLHDLNLACRYAHHIVAIRDKKIYAQGKPEEIISCQLVKDVFQMD
CQVTYDPLFGTPLCIPYGKGRCILQKEGVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-56 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-56 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-56 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-53 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-53 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-48 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_1984 YP_002949981.1 ABC transporter BAC0164 Protein 2e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_1984 YP_002949981.1 ABC transporter VFG0925 Protein 6e-59 52
GWCH70_1984 YP_002949981.1 ABC transporter VFG1042 Protein 2e-48 45