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Name : GWCH70_1642 (GWCH70_1642) Accession : YP_002949695.1 Strain : Geobacillus sp. WCH70 Genome accession: NC_012793 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1718140 - 1721151 bp Length : 3012 bp Strand : - Note : KEGG: fma:FMG_1372 type I restriction-modification system restriction subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicases DNA sequence : ATGTTTACAGAAGAGCAATTAGAAAATGTCGTGATTGAGTATTTTCAAGAGCTTGGATATAACTATCTACCCGCAAGTGA GTTAAAGCGGGATGAGAAAGAGGTTTTGCTGTTTGACCGTTTGGAAGCAGCGTTGGTGAGACTGAATCCGAGTTTGTCTT TGGATGTCATCCGTGAAGCAATTCGGAAAATCCGTCATTTTGAAACAAACGATGTGTTTACGAACAATAAAGTGTTTCAT AAGTATTTGACGGAAACGGTGGAAGTGGCGGAGTTTGTGAATGGGGAAACGGTTTATCACCGCGTTCGGCTCATCGATTG GGAAGTACCTGAAAATAATGATTTTCTTGTTGTCAATCAATTAGAGGTCGTTGAAAAAGGCCAGAAGAAAATCCCTGACA TTGTGCTCTATGTAAACGGAATCCCGCTTGTCGTGTTCGAGTTAAAAAGTACGTCACGTGAAGAAGTCGATATTGAGGAT GCGTACAAACAATTGAAAAATTATATGAACGTCCACATTCCTTCCTTATTCTATTACAATGCGTTTCTTGTGATTAGTGA TGGGGTGAAAGCCCGAGCTGGAACAATCACAGCGCCGCTTGATCGTTTTTTGGCATGGAAAAAGATTCATATCGAAGACG AGGTTGTTGAAAATCGTGAATTAGAAACATTGATGTACGGATTATTCAATCAAAAACGCTTTTTGGATGTCATAAAAAAC TTCACGTTGTTTACGAATGAAGCAAAAATTATGGCTGCGTATCACCAATATTATGGAATGAAAAAAGCTATCGAGTCTAC AATACGGGCAGTTGGGAAAGATGGACGCGCCGGGGTTATTTGGCATACGCAAGGAAGCGGCAAAAGTTATTCCATGGTAT TCCTTGCTGGAAACTTAGTGAAACGGGAAGAATTGAAAAACCCAACGATTGTCGTCATTACCGACCGGAATGATTTAGAC GGACAGCTATTCGAAACGTTCTCCGGAGCAAGTGAATTTTTGCGGCAAACACCACAACAGGCGGAAACGCGGAGTCATAT AAAAGAGCTATTGGAAAATCGCCAAACCGGTGGAATTATTTTTTCAACGATTCAAAAATTTGAAGAAGAAACCGGCTTGC TTTCTGATCGGGAAAATATCATTGTCATGGTCGATGAAGCTCACCGCTCGCAATACGGTGTCGATCCGAAATATGATATT GTGACCGGTGAACAAAAGTACGGCTATGCGAAATATTTGCGGGAAGCGTTGCCGAATGCGACGTATATTGCGTTTACTGG CACACCGATTGAAACAACGGATAAATCGACGACTGGATTGTTCGGTGATGTCATTGATGTGTATGATATGACACAAGCGG TTCAAGACGGGGCAACCGTGAAAATTTATTATGAATCCCGCTTGGCGAAAGTAAAACTAGACGAGAAAAAAATGAATGAA ATTGATCAAGAATATTGGAATATGCAAGTCAACGAAGGTGTTGACGACTATATCGTCGAACAAAGCCAGAAAAGCTTAAG CCGCATGGAGCAAATTATCGGCGATAAAGACCGAATTAGAGAAGTCGTAGCCGACATTATTAGTCATTACGAGGAGCGCG AAAATCTTGTTGCTGGGAAAGCGATGATTGTTGCCTATTCGCGAAAAACAGCGTTCGCAATGTATAAAGAAATCATGAGA CAACGCCCCGATTGGAAGGAAAAAGTGAAAATTGTCATGACGGAAAACAACCAAGATCCGGAAGAATTAGCGAAGCTTGT TGGGAATAAACAAACGCGGAAGCAGCGGGAGAAAGAATTTAAAGATGTCAATCATCCGTTCAAAATCGTGATTGTCGTTG ATATGTGGCTAACTGGTTTCGACGTTCCAGCGCTTGATACGATGTATATCGATAAGCCGATGAAGGCGCATAACTTGATG CAAGCCATCGCTCGCGTCAATCGTGTCTATCCGGGCAAGACGGGCGGATTGATTGTCGACTATATCGGTTTAAAGAGAGA CTTAATGGAAGCACTCAAAACGTATACAAAGCGTGACCAAGATAAAGTGCAGGAAAACGAGCAAGCTCGCGATATCGCGC TAAATATTCTTGAAGTTCTTCGCAATATGTTTCACGAGTTTGACTACAGTGCGTTTTTCGGGGACAGCGACAAAAAACGT TATGAAGTCATCCGGGATGGTGCGGAATTTGTTCAACAAACGGAAAAAAGAAAATCACTGTTTATGACAGAAACGAAGAA GTTAAAGGATGTTTATAAAATTTGTACCGGTTTGCTTTCCAAAGAGCAAAAAGAGGAAATTTCCTACTTTATTGCCGTTC GTTCTTTTATCATGAAATCTTCGCGAAAAGGAGCACCGGATTTAAAAGAAGTAAATGAACGAATCTCAAAAATGTTAGAA GAGGCCATTTTAGAAGATGAAGTGATGGTATTAACGCAGGCTTCTTCATCCGAGAGTTTTGACTTGTTAAACGAAGAGAA TATAAAGAAACTTCGCGCGCTGCCGCAAAAGAATATCGCCGCTAATATTCTCATGCGCGTACTAAAGGAAAAACTGCAAG ATGTGAAAAAGAAAAACATGACCGTCAGCCAAACGTTTTCCAAACGCTTTGAAAAAATATTAGAAAAATACAACAACCGT AACGATTATACGGATGTATACGAAGTATTTGAAGAACTCATTAAATTTAAAGAAGAATTGGAAGCAGCGATTCAAGCAGG AAAACAACTTGGTTTAACGGATGAGGAAAAAGCATTTTTTGATGTGTTAGGCTCAGATCCGGATATAAAAAAATTAATGG AAGATGAAATTTTAATCAAAATCGCGAAAGAGCTGGCGAAAACAGTGAAAGAAAATCGCACGCACGATTGGGATAAAAAA GAACAAGCCCAAGCACGCATGCGCCTGCAGATAAAAAAAGTTCTACGTAAATATGATTATCCTCCAAATAAACAGCCAAA AGCAGTGGAAGATGTATTAATGCAAGCGAAGTTACAGTGTCAGAATATGTGA Protein sequence : MFTEEQLENVVIEYFQELGYNYLPASELKRDEKEVLLFDRLEAALVRLNPSLSLDVIREAIRKIRHFETNDVFTNNKVFH KYLTETVEVAEFVNGETVYHRVRLIDWEVPENNDFLVVNQLEVVEKGQKKIPDIVLYVNGIPLVVFELKSTSREEVDIED AYKQLKNYMNVHIPSLFYYNAFLVISDGVKARAGTITAPLDRFLAWKKIHIEDEVVENRELETLMYGLFNQKRFLDVIKN FTLFTNEAKIMAAYHQYYGMKKAIESTIRAVGKDGRAGVIWHTQGSGKSYSMVFLAGNLVKREELKNPTIVVITDRNDLD GQLFETFSGASEFLRQTPQQAETRSHIKELLENRQTGGIIFSTIQKFEEETGLLSDRENIIVMVDEAHRSQYGVDPKYDI VTGEQKYGYAKYLREALPNATYIAFTGTPIETTDKSTTGLFGDVIDVYDMTQAVQDGATVKIYYESRLAKVKLDEKKMNE IDQEYWNMQVNEGVDDYIVEQSQKSLSRMEQIIGDKDRIREVVADIISHYEERENLVAGKAMIVAYSRKTAFAMYKEIMR QRPDWKEKVKIVMTENNQDPEELAKLVGNKQTRKQREKEFKDVNHPFKIVIVVDMWLTGFDVPALDTMYIDKPMKAHNLM QAIARVNRVYPGKTGGLIVDYIGLKRDLMEALKTYTKRDQDKVQENEQARDIALNILEVLRNMFHEFDYSAFFGDSDKKR YEVIRDGAEFVQQTEKRKSLFMTETKKLKDVYKICTGLLSKEQKEEISYFIAVRSFIMKSSRKGAPDLKEVNERISKMLE EAILEDEVMVLTQASSSESFDLLNEENIKKLRALPQKNIAANILMRVLKEKLQDVKKKNMTVSQTFSKRFEKILEKYNNR NDYTDVYEVFEELIKFKEELEAAIQAGKQLGLTDEEKAFFDVLGSDPDIKKLMEDEILIKIAKELAKTVKENRTHDWDKK EQAQARMRLQIKKVLRKYDYPPNKQPKAVEDVLMQAKLQCQNM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 43 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 5e-174 | 41 |
