Gene Information

Name : GWCH70_0011 (GWCH70_0011)
Accession : YP_002948219.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 20361 - 21245 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGGCAATTACAGGTACAGATCGTGTAAAACGGGGAATGGCGGAAATGCAAAAAGGCGGCGTCATCATGGACGTGGTGAA
TGCGGAACAGGCGAAAATCGCAGAGGCAGCCGGTGCAGTAGCGGTGATGGCATTGGAACGCGTCCCTGCTGATATTCGTG
CCGCTGGCGGTGTCGCGCGCATGGCAGATCCGACGGTCATTGAAGAAGTGATGAAGGCCGTATCGATTCCTGTTATGGCC
AAAGCGCGTATCGGTCATTACGTCGAAGCACGCGTCCTTGAGGCGTTAGGTGTTGATTATATTGATGAGAGTGAAGTATT
AACACCAGCTGATGAAGAATTTCATATTGATAAAAGACAATTTACCGTTCCGTTTGTTTGCGGTTGTCGCGACTTAGGAG
AAGCGTCGCGCCGCATTGCTGAAGGGGCATCGATGCTTCGCACAAAAGGAGAACCAGGAACAGGAAACATTGTCGAGGCA
GTGCGTCATATGCGCAAAGTAAATGCGCAAATACGAAAAGTCGTCAGCATGAGTGAAGACGAGCTTGTGACAGAAGCGAA
GAATTTAGGTGCTCCGGTTGAAGTATTGCGCGAAATTAAGCGGTTAGGCCGCCTCCCTGTCGTCAACTTTGCCGCAGGCG
GTATCGCGACCCCGGCTGACGCGGCATTGATGATGCATTTAGGTGCAGATGGGGTATTTGTCGGTTCAGGTATTTTTAAA
TCGGAAAATCCAGAAAAATATGCGCGGGCGATCGTTGAAGCAACGGCACATTATGAAGATTACGAGCTAATCGCCCATTT
ATCCAAAGGATTAGGTAGCGCAATGCGCGGCATTGATGTCGCATCATTATTGCCAGAACAACGTATGCAAGAGCGTGGTT
GGTAA

Protein sequence :
MAITGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMA
KARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEASRRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQIRKVVSMSEDELVTEAKNLGAPVEVLREIKRLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATAHYEDYELIAHLSKGLGSAMRGIDVASLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-75 65
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-74 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-74 64