Gene Information

Name : GWCH70_1399 (GWCH70_1399)
Accession : YP_002949494.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1469883 - 1470623 bp
Length : 741 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afl:Aflv_1290 Manganese ABC transporter ATpase

DNA sequence : 
ATGAAGCCGTTAACAGTCGATCAGCTGACGGTCGCTTATCAGCGCCAAGCGGTGTTAGAAGACGTTTCTTTTTCCGTGCC
GGAAGGGAAATTGATTGGCATTATCGGACCAAATGGAGCAGGAAAATCAACATTAATGAAGGCTATTTTAGATTTAATTC
CGCGCGTGAAAGGCGATATCGCTATTTATGGAAAAGCGTATAAGCAACAACGCCATCTTGTCGGCTATGTCCCGCAGCGC
GGTTCGGTTGATTGGGATTTTCCGACGAATGCGCTTGATGTGGTTCTCATGGGACGATACGGTCACATTGGGCTATGGAA
ACGCCCGCGCAAAGAAGATGTGGCGGTGGCGATGCAATGTTTAGAAAAAGTCGGAATGACCCCATATGCGAAACGGCAAA
TTAGCCAACTTTCCGGCGGACAACAACAGCGCGTTTTTTTAGCGCGTGCACTTGCACAAGATGCATCGATCTATTTAATG
GATGAACCGTTTGTCGGCGTTGATGCCGCAACGGAAAAGGCGATCATCGAATTATTAAATGAATTAAAAGCAAAAGGCAA
AACGGTTCTTGTTGTTCATCACGACTTGCAAACGGTGCGAGATTATTTTGACTGGGTGCTGCTTTTAAACAAGCGAGTGA
TCGCCGCTGGGCCGACGGAAGAAGTATTTACGTTTGAGAATTTACAAAAAACGTACGGCGGAAAGCTTGCGTTTCTTTCC
CCGCAACATGTCGTGAGGTGA

Protein sequence : 
MKPLTVDQLTVAYQRQAVLEDVSFSVPEGKLIGIIGPNGAGKSTLMKAILDLIPRVKGDIAIYGKAYKQQRHLVGYVPQR
GSVDWDFPTNALDVVLMGRYGHIGLWKRPRKEDVAVAMQCLEKVGMTPYAKRQISQLSGGQQQRVFLARALAQDASIYLM
DEPFVGVDAATEKAIIELLNELKAKGKTVLVVHHDLQTVRDYFDWVLLLNKRVIAAGPTEEVFTFENLQKTYGGKLAFLS
PQHVVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-51 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-51 47
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-51 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-51 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-51 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-48 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-48 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_1399 YP_002949494.1 ABC transporter BAC0400 Protein 3e-65 59
GWCH70_1399 YP_002949494.1 ABC transporter BAC0350 Protein 2e-51 47
GWCH70_1399 YP_002949494.1 ABC transporter BAC0440 Protein 5e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_1399 YP_002949494.1 ABC transporter VFG0526 Protein 2e-51 47