Gene Information

Name : GWCH70_0083 (GWCH70_0083)
Accession : YP_002948289.1
Strain : Geobacillus sp. WCH70
Genome accession: NC_012793
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 107795 - 110230 bp
Length : 2436 bp
Strand : +
Note : PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: gtn:GTNG_0078 negative regulator of genetic competence ClpC/MecB

DNA sequence :
ATGATGTTTGGAAGATTTACGGAGCGGGCGCAAAAAGTATTGGCGCTAGCTCAAGAGGAAGCAATACGCCTTGGCCATAA
TAACATTGGAACGGAACATATTTTATTAGGTTTAATTCGCGAGGGGGAAGGAATTGCAGCAAAAGCATTAATGGCTTTAG
GGCTTGGGCCAGAAAAAATTCAAAAAGAGGTAGAATCGTTAATCGGTCGCGGCCATGAAGTTTCCCATACGATCCATTAT
ACGCCGCGTGCGAAAAAAGTAATTGAACTATCGATGGATGAAGCGAGAAAGCTTGGCCATTCCTATGTAGGAACAGAACA
TATTTTACTAGGTCTTATTCGTGAAGGTGAAGGAGTTGCGGCCCGCGTACTTAACAATTTGGGAGTAAGTCTTAATAAAG
CGCGCCAACAAGTGTTGCAACTGCTTGGAAGCAATGAGTCTGTTTCCGGTCATTCAGGAGGCGGTGCTTCACACGTAAGT
ACACCAACATTAGACAGCTTAGCTCGCGATTTAACGGCGATTGCTCGTGAAGGAAGATTAGACCCTGTTATTGGCAGAAG
CAAGGAAATTCAGCGCGTTATTGAAGTGTTAAGCCGTCGTACAAAAAATAACCCGGTGTTAATCGGAGAACCTGGGGTTG
GGAAAACAGCCATTGCTGAAGGTCTTGCGCAACAAATCGTAAATAATGAGGTTCCAGAAACACTCCGCGATAAGCGAGTA
ATGACGTTAGATATGGGAACGGTAGTAGCTGGTACAAAATACCGCGGTGAATTTGAAGATCGTCTGAAAAAAGTGATGGA
TGAGATTCGTCAAGCAGGAAATATCATTCTCTTCATTGATGAGCTCCATACGCTTATTGGCGCAGGTGGTGCAGAAGGTG
CGATTGACGCATCGAACATCTTGAAGCCAGCGCTTGCCCGTGGGGAGTTGCAATGCATTGGTGCGACTACATTGGATGAG
TATCGGAAATATATTGAAAAAGACGCGGCATTAGAACGTCGTTTCCAACCAATTTACGTCGATGAACCGACGGTAGAAGA
ATCGATTCAAATTTTAAAAGGATTGCGCGATCGCTATGAAGCGCATCACCGTGTATCTATTTCGGATGAAGCAATCATTC
AGGCAGTAAAATTATCTGACCGCTATATTACTGACCGTTTCCTTCCAGATAAAGCAATCGATTTAATCGATGAGGCTTGT
TCGAAAGTTCGCCTTCGTTCGTTTACTGCTCCTCCACAATTAAAGGAGCTTGAGCAAAAACTTGAGGAAGTACGCAAAGA
AAAAGATGCTGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTGCGTGATATGGAACAACGTTTACGTGAAGAAT
TAGAAGAAACGAAACGCGCGTGGAAAGAAAAACAGGGGCAGGAAAACTCTGAAGTAACAGTGGAAGACATTGCGATGGTT
GTATCAAGCTGGACAGGAATTCCGGTGTCAAAACTTGCACAAACAGAAACAGAACGATTATTGAAACTAGAAGAAATTTT
ACATTCCCGCGTCGTTGGTCAAGATGAAGCAGTAAAAGCAGTTGCCAAAGCAGTTCGGCGTGCGCGCGCTGGATTAAAAG
ATCCGAAACGCCCGATTGGCTCGTTCATTTTCCTCGGTCCAACTGGTGTTGGAAAAACAGAATTAGCAAGAGCGCTTGCA
GAAGCGATGTTCGGTGATGAAGACGCACTTATTCGCATCGATATGTCGGAATATATGGAGAAGCACTCGACATCTCGTTT
AATCGGTTCGCCTCCTGGCTATGTCGGATACGAGGAAGGCGGTCAACTAACGGAAAAAGTGCGCCGCAAACCGTATTCGG
TCGTGTTGTTAGATGAGATGGAAAAAGCGCATCCGGACGTATTTAACATTTTGCTGCAAGTGTTGGAAGACGGGCGTTTA
ACTGATTCGAAAGGAAGAACGGTTGATTTCCGCAATACGATTATCATTATGACATCGAACGTCGGTGCGGATGCGTTAAA
GCGGAATAAATACGTCGGCTTTAATATCCAAGATGAAGATCAGAAGTATAAAGACATGAAAGGAAAAGTCATGGACGAGT
TAAAGAAAGCATTTCGTCCGGAGTTTTTAAACCGAATTGATGAAATTATTGTCTTCCATTCACTTGAAAAACAACATTTA
AAAGAAATTGTAAAACTAATGGCAGAACAGCTTGTAAAACGCTTAAAAGAACAAGATATCGATTTAGAGTTAACGGATGC
GGCCATTGAAAAAATTGTTTCCGAGGGATATGACCCAGAATACGGTGCTCGTCCATTGCGCCGCGCGCTACAAAAACATG
TAGAAGATCGTTTGTCGGAAGAGCTGTTAAAAGGAACGATTGCCAAAGGGCAAAAAGTCGTTGTAGACGTAAAAGACGGA
GAGTTCGTCGTTTTATCAGAGCAAGCGGTGATGTAA

Protein sequence :
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQKEVESLIGRGHEVSHTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESVSGHSGGGASHVS
TPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDE
YRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIIQAVKLSDRYITDRFLPDKAIDLIDEAC
SKVRLRSFTAPPQLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAWKEKQGQENSEVTVEDIAMV
VSSWTGIPVSKLAQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
EAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDEDQKYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKQHL
KEIVKLMAEQLVKRLKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDG
EFVVLSEQAVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-93 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GWCH70_0083 YP_002948289.1 ATPase AAA VFG0079 Protein 0.0 79
GWCH70_0083 YP_002948289.1 ATPase AAA VFG0080 Protein 2e-146 53