Gene Information

Name : Vapar_6130 (Vapar_6130)
Accession : YP_002947960.1
Strain :
Genome accession: NC_012792
Putative virulence/resistance : Virulence
Product : Betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 851093 - 852571 bp
Length : 1479 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B2738 aldehyde dehydrogenase (acceptor)

DNA sequence :
ATGCCTTTTTCTTCCATCCGCCACCAGCTCTTCATCGACGGCCGCTTCGTCGACGCCGAATCCGGCGAGACCCTGGCCAC
GCTCAACCCGCACGACAACACACCCATCGCCCATGTCGCGTTGGCCGGCAAGGCCGACGTCGACAAGGCCGTGGCCGCCG
CCAGGCGTGCGTTCCCGAAGTGGAGCCGCATGGCCGCCGCCGATCGCGGCCGCATCCTGCTGAAGCTTGCGGACCTGATC
GAGGCCAATGGCGAAGAACTCGCGCGGCTCGAGTCGCTCGACACCGGCCATCCGATCCGCGACTCGCGCCGGCTCGACGT
GCCGCGCACCGCCGCGTGCTTCCGCTACTTCGGCGGCATGGCCGACAAGTTCCAGGGCGAAACCATTCCGGTGGAAGAGG
GCTTTCTCAACTACACGCTGCGCGAGCCGGTCGGCATCGTCGGGCAGGTGGTGCCGTGGAACTTCCCGCTCATGTTCACG
AGCTGGAAGATGGCGCCCGCGCTCGCGGCCGGCAACTGCATCGTGATGAAGCCGGCCGAGATCACGCCGCTCAGCTCGCT
GCGCATCGCGGAGCTCATGGCCGAGGCGGGCGTTCCGCCCGGCGTGGTCAACATGCTGCCGGGCCTGGGCAGCGTGGCGG
GCCAGTACATCGCCGAGCATCCGGAGATCGCCAAGATCGCCTTCACCGGCAGCACCGCCACCGGCCGGCGCATCGTGCAG
GCCAGCGCGGGCAACCTCAAGAAGGTGCAGCTCGAGCTCGGCGGCAAGGGGCCCAACATCGTGTTCGAGGATGCGAACCT
GCAGGCTGCCGTGAACGGCAGCGCCTGGGCCATCTTCCACAACCAGGGGCAGGCCTGCATCGCGGGCTCGCGGCTGATGC
TGCACGAGAAGATCGCCGATGCGTTTCTCGAACAGTTCATCCCGCTTGCGCAGTCGATCCGCCTGGGCAACCCGCTCGAC
GAGGCCACCGAGATGGGCCCGCTCACGAGTGCCCAGCACCGCGACCGCGTGCTGAGTTACGTCGAAGTCGCGCAAGGCCA
GGGCGGCGAGGTGCTGGCTGGCGGCACCTCGCCCGGCGGCGATCTTGCACAGGGCTGCTACGTCGCGCCGACCGTGGTGC
GTGCGAAGTCCTACCAGGACCGCGTCGCACAGGAAGAAGTGTTCGGCCCCTTCGTCACAGTGCTCACCTTCAAGAGCGAC
GAGGAGGCGATGCAGATCGCCAACGGCACCGACTACGGCCTGGGCAGCGGCCTGTGGACGCGCGACCTGCAGCGCGCCCA
CAAGGTGGCGCGCGACCTGCATGCCGGCATGGTCTGGATCAACAGCTACAAGCGCGTGAACCCCGGCTCGCCCTTCGGCG
GCGTGGGCCAGAGCGGCTACGGCCGAGAGATGGGCTTCGACGCCATGCGCGAGTACACGCAGGTCAAGAGCGTGTGGGTC
AACGTCGACGCGCAGATTCCGCCGCACTTCGTGCGCTGA

Protein sequence :
MPFSSIRHQLFIDGRFVDAESGETLATLNPHDNTPIAHVALAGKADVDKAVAAARRAFPKWSRMAAADRGRILLKLADLI
EANGEELARLESLDTGHPIRDSRRLDVPRTAACFRYFGGMADKFQGETIPVEEGFLNYTLREPVGIVGQVVPWNFPLMFT
SWKMAPALAAGNCIVMKPAEITPLSSLRIAELMAEAGVPPGVVNMLPGLGSVAGQYIAEHPEIAKIAFTGSTATGRRIVQ
ASAGNLKKVQLELGGKGPNIVFEDANLQAAVNGSAWAIFHNQGQACIAGSRLMLHEKIADAFLEQFIPLAQSIRLGNPLD
EATEMGPLTSAQHRDRVLSYVEVAQGQGGEVLAGGTSPGGDLAQGCYVAPTVVRAKSYQDRVAQEEVFGPFVTVLTFKSD
EEAMQIANGTDYGLGSGLWTRDLQRAHKVARDLHAGMVWINSYKRVNPGSPFGGVGQSGYGREMGFDAMREYTQVKSVWV
NVDAQIPPHFVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-85 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_6130 YP_002947960.1 Betaine-aldehyde dehydrogenase VFG0082 Protein 4e-79 41