Gene Information

Name : Vapar_5982 (Vapar_5982)
Accession : YP_002947819.1
Strain :
Genome accession: NC_012792
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 709272 - 710843 bp
Length : 1572 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: dia:Dtpsy_2523 transposase IS66

DNA sequence :
GTGATCGACACGGCCGACCTTGACCACCTGGACGCGCAGCAACTGCGCGAGATGGTCCTCTCCCTGAGGAGAGGGGCGGC
AGCCGACAAGCTCGAGATCGCACGCCGCGACCACGAGATCGCGTTCAAGCAAGCGGCCATCGACAAGCTCACGCACGAGA
TGGCCGTGCTCAAGCGACTGAAGTTCGCCGCCAAGTCGGAAGCCTTCAATGCCGAGCAGAAGAGCCTGCTGGAGGAGACC
ATCGACGCCGACTTGGCAGCGATGGAGCGTGAGCTGGAGGACCTCGCGGCGGTGCCGGCCGCGCAGCGCGAGAAGCAGCA
ACCCAAGCGCCAGGCACTGCCCGCGCACCTGCCGCGCCGGGAGATCCGCCACGAGCCCGAGAGCACCACCTGTGCCTGCG
GCTGCACGCTCCAGCGCATCGGTGAGGATGTGGCCGAGAAGCTCGACTACCAGCCAGGCGTGTTCAGCGTCGAGCGCCAC
GTGCGCGGCAAGTGGGTCTGCACGAACTGCGAGACGCTGGTGCAGGCGCCCGTCGCCCCGCACATCATCGACAAGGGCAT
CCCGACGGCTGGGCTGCTCTCGCAGGTGCTGGTGGGCAAGTACCTGGACCACTTGCCGCTGTACAGGCAGGAAGCCATCT
TCGGTCGCGCGGGCCTCGCCATCCCGCGCTCGACGCTGGCCAGTTGGGTTGGACAGTGCGGCGTGCAGCTGCAGCCTCTG
GTCGACGCGCTCAAGTGCGAGATGCTCGAAGACCGCGTGCTGCATGCCGACGAGACGCCGGTGGCGATGCTCAAGCCCGG
CAACGGCAAGACACACCGGGCGTACCTGTGGAGCTACTGCACGACGAGCTACAGCGCGCTGCGCGCGGTGGTGTTCGACT
TCGCCGACAGCCGCGGCGGCCAGCATGCGCGCGCCTTCCTCGGGCTGCCGGGCGAGCATGGCTGGCGCGGCACACTGGTG
TGCGACGACTTCAGTGGCTACAAGGCGTGCTTCGAGCTGGGCATCACCGAGGCGGGTTGCCTGGCCCATGCAAGGCGCAA
GTTCCACGAACTCTGGGCCAATCACGGCAGCCCGATCGGCGAGCAGGCGCTGAAGTTCTTCGGCGAGCTCTACGCCGTCG
AGCGCGAGGTTGCTGAGCTTGTGCCTGAGGATCGAAGGCGAATACGACAAGAGAGGTCGCGCAAGGTGGCTGATGCCCTG
CAGCAATGGCTCGCCGGGCAACGGCAGAGGGTGCCGGATGGTTCGACCACGGCCAGGGCAATCGACTACAGCCTCAAGCG
CTGGCAGGCGCTCACGCGCTACATCGACGACGGCGATCTGCCGGCGGACAATAACTGGGTGGAGAACCAGATCCGCCCGA
TCGCCATCGGACGATCGAACTGGCTGTTCGCGGGATCGCTACGGGCAGGCCAGCGCGCCGCGGCCATCATGAGCTTGATC
CAGTCAGCGAAGCTCAATGGACATGAGCCGCACGCGTACCTCAGCGACATTCTTGAGCGGCTGCCTACTCACCCGGCCAG
TCGCGTCGGAGAGTTGCTGCCGCATCGCTGGCAGCCAGCCGCAGTGCGCTGA

Protein sequence :
MIDTADLDHLDAQQLREMVLSLRRGAAADKLEIARRDHEIAFKQAAIDKLTHEMAVLKRLKFAAKSEAFNAEQKSLLEET
IDADLAAMERELEDLAAVPAAQREKQQPKRQALPAHLPRREIRHEPESTTCACGCTLQRIGEDVAEKLDYQPGVFSVERH
VRGKWVCTNCETLVQAPVAPHIIDKGIPTAGLLSQVLVGKYLDHLPLYRQEAIFGRAGLAIPRSTLASWVGQCGVQLQPL
VDALKCEMLEDRVLHADETPVAMLKPGNGKTHRAYLWSYCTTSYSALRAVVFDFADSRGGQHARAFLGLPGEHGWRGTLV
CDDFSGYKACFELGITEAGCLAHARRKFHELWANHGSPIGEQALKFFGELYAVEREVAELVPEDRRRIRQERSRKVADAL
QQWLAGQRQRVPDGSTTARAIDYSLKRWQALTRYIDDGDLPADNNWVENQIRPIAIGRSNWLFAGSLRAGQRAAAIMSLI
QSAKLNGHEPHAYLSDILERLPTHPASRVGELLPHRWQPAAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 7e-145 61
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 5e-131 54
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-62 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_5982 YP_002947819.1 transposase IS66 VFG1700 Protein 1e-62 44