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Name : Vapar_5816 (Vapar_5816) Accession : YP_002947671.1 Strain : Genome accession: NC_012792 Putative virulence/resistance : Virulence Product : type IV secretion/conjugal transfer ATPase, VirB4 family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 520074 - 522581 bp Length : 2508 bp Strand : + Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: xfa:XFa0007 conjugal transfer protein DNA sequence : ATGAAGCTGCTCTCACGCCCCGAGCACGCGCTGCGCCGCGAAGCCGGCGCCGCGACCATGATTCCGCTTTCGGCGCATGT GGACGAGCATGTGGCCCTGACACGTGCCGGAGACTATGTGCAGACACTCCGCCTGGCCGGCACGAGCTTCGAAAGCGCGG ACGACGAGGACATCAACAGCTGGCATGAGCGCCTCAATGTCCTGCTGCGCAACATCGCGTCGCCCAACCTGGCGCTCTGG ACCCACGTGATCCGCCGCCGCGAGATGGCCTATCCGGCCGGGCGGACGACGCCCGGCTTCGCCGACGAGATCGAGCAGCG CTATCGCCGCAAGATGGCTGGCGAACGGCTGATGGTCAATGAACTGTACCTGTCGGTCGTCTTCCGGCCGCAGCCCACCC GCATCGGCAACGCCGCATTGCGGCTGTTCAAGCGCGCGGACCCGGAGGGTGCGCGGGCGGAGCTGCGCGATGCGCTGGAC GCCTGCAGCAAGCTGCGCCAGGAACTGCTCGCCGCCCTGGAACGCTACGACCCCGAAGCACTGGGCATCTATCGGCTGCA GGGGAACGACGGGCTTTTTTCCTCCCTCGTGGAATTCCACGGCCTGCTCGTCAACGGGGAGTGGCAGCGCATGCCGCTGC CGCGCGCCCCCCTCAACGAGGTCCTGGCCACCACCCGGCCCTTCTTCGGCAACGAGGCCATGGAATACCGGGCCGGCACC CAGACCCGCATTGGCGCCTTCCTCGGCATCAAGGAATACCCCACGCCCACCGCGCCGGGCATGTTCAGCGCCCTGCTGAC CGCACCTTTCCCCTTCGTGCTCACGCAAAGCTTCACCTTCCTGGCCAAGAGCACGGCCACCGACATGATGAGCCGCCAGC ATCACCGGATGGCCGCCGCCGGTGACCTCGCAGTCTCGCAGGCCGAGGAACTCAAGGACGCACTGGACGACCTGATGAGC AATCGCTTCGTGGTGGGCGACCACCATTTCAGCCTGCATGTGCTGGCCGACACCTACGACGGCCTCAGCGAGGCCGAGGG CCGGCCCCGTCTGAAGCAACTCAACGACAACGTCGCCCGCGCCCGCTACCTGCTGGGCGACGCGGGAATGGTGGTGGCCC GCGAGGACCTCGCGCTGGAGGCGGCCTTCTGGGCGCAGCTGCCGGGAAACTTCGGCTACCGCAGCCGCAAGGCGCCCGTC ACCAGCCGCAACTTCGCCGCCATGTCGCCCTTCCACAATTTCCCGACCGGCCGGGCAACGGGCAACTACTGGGGCGATGC GCTGACCATGTTCACCACGCGCGCGGGCTCGCCCTACTACTTCTCGCTGCATGCGAGCGACCCGCGCAGCCGGGACGGCG GCAGCCGCCGCGATGTCGGACACATCACGGGCGTGGGACCGGTCGGGACCGGCAAGACCACGCTGCTGGGCTTCTGCATG GTGGCGATCTGCAATCGCCTCGACGCCACACAAGTGGTCTTCGACAAGGATGAAGGGCTGCATATCCTGGTGCGGGCCCT GGGCGGCCAGTACCTCCCACTCAAGAACGGGGCACCCACCGGCTGCAATCCGTTGCAGCTCGACGATTCGATCGCCGACA ACGTCGAGTTCATGCGGCACTGGCTCAGGCGCCTCGTGATGCGCACGCCGGGCGAGACCCTGACCGTCCGGCAGGAAGAC GATCTCGACCAGGCACTGCGCGGCACCCTGAAGCTCGAGCGCTCTTTCAGGCGCCTGTCCCGGCTCGCCGCCTTCCTCGA CATCACGGATCCGGAGGGGATGCACGCGCGCCTTCGGCGGTGGTGCGCCTCGGAGCACGGCGACTATGCCTGGGTCTTCG ACAACGAGCACGACCACGTGGCCCCGCTGCTTGCCCGGCACGCCCTCGTGGGCTTCGATGTGACCGACTTCCTGGACAAC GAGGTCGTGCGCGCCCCGCTGACCCTGTACCTCTTTCATCTCGTGAACCGGATGGTGGACGGCCGCCCGCTGGTGTGCTG GATGGACGAGTTCGCCAAGCTGTTGAGCGATCCGGCCTTCGCGAAGTTCGCCAAGAACGGCCTGGAGACCTGGCGCAAGA AGAACGCGAATATCGCCACGTTCACCCAAAGCACCAGCCACGTGCTCGATTCCGGCATTGCCCGCGCGATCGTCGAGCAG ACGCCGACGAAGATCCTGTTCCCCAATCCGGAGGCGGACTACGACGAATACACCCGGGGCTTCAACCTGACCGACCGGGA GTTCGCGCTGATCAAGCAGGAGATCGAGCCTGGCTCTCGCCAGTTCCTTATCAAGCAGAACCATGTCAGCGTGGTCGCGC AGCTCGATCTCCATGGATTCGACGACGCCTTGCACGTCATCTCCGGGCGCACCGGCAACGTCCGCCTCATGCGTGAACTC ATCGCGATCTGCGGACCGGATCCCGCCCAATGGCTGCCGTCTTTCCGCAGGGCGCTTGCGAACAACCCTTCCCGTTCACC CTCACACCAGGAGATCTCCCATGCGTAG Protein sequence : MKLLSRPEHALRREAGAATMIPLSAHVDEHVALTRAGDYVQTLRLAGTSFESADDEDINSWHERLNVLLRNIASPNLALW THVIRRREMAYPAGRTTPGFADEIEQRYRRKMAGERLMVNELYLSVVFRPQPTRIGNAALRLFKRADPEGARAELRDALD ACSKLRQELLAALERYDPEALGIYRLQGNDGLFSSLVEFHGLLVNGEWQRMPLPRAPLNEVLATTRPFFGNEAMEYRAGT QTRIGAFLGIKEYPTPTAPGMFSALLTAPFPFVLTQSFTFLAKSTATDMMSRQHHRMAAAGDLAVSQAEELKDALDDLMS NRFVVGDHHFSLHVLADTYDGLSEAEGRPRLKQLNDNVARARYLLGDAGMVVAREDLALEAAFWAQLPGNFGYRSRKAPV TSRNFAAMSPFHNFPTGRATGNYWGDALTMFTTRAGSPYYFSLHASDPRSRDGGSRRDVGHITGVGPVGTGKTTLLGFCM VAICNRLDATQVVFDKDEGLHILVRALGGQYLPLKNGAPTGCNPLQLDDSIADNVEFMRHWLRRLVMRTPGETLTVRQED DLDQALRGTLKLERSFRRLSRLAAFLDITDPEGMHARLRRWCASEHGDYAWVFDNEHDHVAPLLARHALVGFDVTDFLDN EVVRAPLTLYLFHLVNRMVDGRPLVCWMDEFAKLLSDPAFAKFAKNGLETWRKKNANIATFTQSTSHVLDSGIARAIVEQ TPTKILFPNPEADYDEYTRGFNLTDREFALIKQEIEPGSRQFLIKQNHVSVVAQLDLHGFDDALHVISGRTGNVRLMREL IAICGPDPAQWLPSFRRALANNPSRSPSHQEISHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 3e-142 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Vapar_5816 | YP_002947671.1 | type IV secretion/conjugal transfer ATPase, VirB4 family | VFG2233 | Protein | 2e-140 | 42 |
