Gene Information

Name : Vapar_5326 (Vapar_5326)
Accession : YP_002947194.1
Strain :
Genome accession: NC_012792
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 24710 - 25480 bp
Length : 771 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ara:Arad_8618 gluconate 5-dehydrogenase protein

DNA sequence :
ATGTCCCATCCCCTCTTCAGTCTCGTCGGCCGCACCGCGCTGGTGACCGGCTCCTCGCGCGGTCTCGGATACGCCATTGC
CGAGGCGCTTGCGCAGGCCGGCGCCAGGGTCGTGCTCAACGGCGTCGATGCACAGCGCCTTGCCCGCGGCGCTGAGGCAT
TGCGGGCCAAGGGCCATGGCGTGGAAATGGCCGCCTTCGACGTGACCGATGAAGCCGCCGTGAGCGATGCTTTCGCCCGT
CTCGACGCCGCGGGCCTTGCGATCGACATCCTGGTCAACAACGCGGGCATCCAGTTGCGCAAACCGCTGGTCGAACTCTC
GTTGCCGGAATGGGACAAGGTGCTGAGCACCAATCTGACAAGTGCCTTCCTGGTCGGCCGCGAAGCCGCGCGCCGGATGA
TCGAGCGCAAGAGCGGCGGCAAGATCATCAACATCGGTTCGCTCACCAGCGAGGCCGCACGCGCAACCGTCGCGCCCTAC
ACCGCAGCCAAAGGCGGCATCAAGATGCTCACGCGCGCCATGACGGCCGAGTGGGCGGAGCACGGCATCCAGGCCAATGC
AATCGGCCCGGGCTACATGGCCACGGAGATGAACACTGCGCTGATCCAGAACCCGGCCTTCGACGGCTGGGTCAAGTCGC
GCACGCCGGCGCGCCGCTGGGGGCGGCCGGACGAGCTCGCCGGCACGGCGATCTATCTCGCATCGTCGGCATCCGACTAC
GTCAACGGCCAGATCTTCTATGTCGACGGCGGCATGCTCGCCGTGCTGTAG

Protein sequence :
MSHPLFSLVGRTALVTGSSRGLGYAIAEALAQAGARVVLNGVDAQRLARGAEALRAKGHGVEMAAFDVTDEAAVSDAFAR
LDAAGLAIDILVNNAGIQLRKPLVELSLPEWDKVLSTNLTSAFLVGREAARRMIERKSGGKIINIGSLTSEAARATVAPY
TAAKGGIKMLTRAMTAEWAEHGIQANAIGPGYMATEMNTALIQNPAFDGWVKSRTPARRWGRPDELAGTAIYLASSASDY
VNGQIFYVDGGMLAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-24 43