Name : Vapar_6356 (Vapar_6356) Accession : YP_002948182.1 Strain : Genome accession: NC_012792 Putative virulence/resistance : Unknown Product : Polypeptide-transport-associated domain protein ShlB-type Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 1105376 - 1107067 bp Length : 1692 bp Strand : + Note : PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rso:RS02577 activation/secretion protein DNA sequence : ATGCCGCTATTCGCGTTGGCGCAGCAAGCCACCACCCCCCAACCTTTCGTCGAGCAGCAACGCCAACAGGAACGCGAACG GGCCCTGCGCGAGCAGAACGAGCGCACGGTCGACCAGCGGCTGCAGGCTGCGCCGCCCGCGCCTACACAGCGCATCCCTG AATCCGAAGCCCCGTGCTTTCGGATCGACCGCGTATTGCTAGTCGGCGAGCAGGCCGAGGCCTTCCATTGGGCGGTGGCC GATCTGTCCGGCCCCGAGGGCAACGATTCACCGCTGGGTCGGTGCCTTGGCACCGCCGGCGTCAACGTGGTCCTGGCCCG CGCCCAGCAGGCCATCATCGCGCGCGGGTTCGTCACCACCCGCGTACTTGCGGCGCCGCAGGACCTGTCCACCGGCACCC TGACCCTGTCGCTGGTGCCCGGGCGCATCGCGGCCATCCGGACCACGCCGGATTCTTCATCCACGCTGCTGGGCAGCGGT GCCTTGCTGGGTTCCGCCATTCCCGCCCGCCCGGGCGACCTGCTGAACCTGCGCGACATCGAGCAGGGCCTCGAGAACCT CAAGCGCGCGCCCACCGCCGAGGCCGACATCCAGATCGAACCTTCGACCGCCCCCGATGCCAAGCCGGGCGACAGCGACC TGGTGGTCAAGTACGTGCAGGCCAAGAAGTGGCGCGTCACCCTGAGCCTGGACGACAGCGGCACCGAGGCCACCGGCCGC TATCAGGCCGGCGCCACGGTGTCGCTGGACAACCCCTTGGGCCTGAACGACCTGTTCTACGTCAGCGCCAACCACAACCT CAATGGCCATGTCTTCAGCGACCCGGCCAAGGGCACCGAAGGCCAGACGGTGCACTACTCGCTGCCCTACGGCTATTGGA TGCTGGGCTTCACCGCCTCCAACAGCCAGTACCACCAAAGAGTGGCCGGGCTGAACCAGGACTACGTCTACGCGGGCAAG ACCAACAACGCCGAGGTCAAGCTCTCGCGCCTGGTCTACCGCGACCAGAGTCGCAAGACCACGGTCGCCCTCAAGGGTTT CCGGCGCGAATCGCGCAACTTCGTGGACGACACCGAGGTCGAGGTGCAGCACCGGGTGGTCGGGGGCTGGGAGCTCGGGC TGAACCACAAGGAGTTCATCGGCGATGCGACGCTGGAAGGCACGCTCGCCTACAAGCATGGCACGGGCGGCTTCGGGTCG ATCGCAGCGCCGGAGGAGGCGTTCGGCGAAGGCACCTCGCGCATGCGGCTGTACACGGCCGAGGTGAGCCTGAACGCGCC GTTCAAGCTGGGCGACCAGAAGCTGCGCTACTCGGGCCTGGTGCGCGCGCAGTGGAACCGCACGCCGCTCACGCCGCAGG ACCGCTTCGCCATCGGCGGGCGCTACACGGTGCGTGGCTTCGATGGCGAGACCAGCCTGATGGGCGAGCGCGGCTGGCTG ATCCGCAACGACATCGGCTGGGCCATGGGGTCGAGCGGGGCGGAGCTGTATGTCGGTGCCGACTACGGGCATGTTGGCGG GCGCTCCACCGCGGACCTGCTGGGCCGCAGCTTGGCGGGTGCGGTCATCGGGGTGCGGGGGCAGTGGAGCAAGCTCAGCT ATGACTTCTTCATGGGGGCGCCGATCCGCAAGCCTGAGGGCTATCGCACGGCCAAGACCACCTTCGGCTTCAATCTCAAT GCGAGCTTTTGA Protein sequence : MPLFALAQQATTPQPFVEQQRQQERERALREQNERTVDQRLQAAPPAPTQRIPESEAPCFRIDRVLLVGEQAEAFHWAVA DLSGPEGNDSPLGRCLGTAGVNVVLARAQQAIIARGFVTTRVLAAPQDLSTGTLTLSLVPGRIAAIRTTPDSSSTLLGSG ALLGSAIPARPGDLLNLRDIEQGLENLKRAPTAEADIQIEPSTAPDAKPGDSDLVVKYVQAKKWRVTLSLDDSGTEATGR YQAGATVSLDNPLGLNDLFYVSANHNLNGHVFSDPAKGTEGQTVHYSLPYGYWMLGFTASNSQYHQRVAGLNQDYVYAGK TNNAEVKLSRLVYRDQSRKTTVALKGFRRESRNFVDDTEVEVQHRVVGGWELGLNHKEFIGDATLEGTLAYKHGTGGFGS IAAPEEAFGEGTSRMRLYTAEVSLNAPFKLGDQKLRYSGLVRAQWNRTPLTPQDRFAIGGRYTVRGFDGETSLMGERGWL IRNDIGWAMGSSGAELYVGADYGHVGGRSTADLLGRSLAGAVIGVRGQWSKLSYDFFMGAPIRKPEGYRTAKTTFGFNLN ASF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 2e-101 | 46 |
S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 4e-101 | 45 |