Gene Information

Name : Vapar_0665 (Vapar_0665)
Accession : YP_002942589.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 726533 - 728008 bp
Length : 1476 bp
Strand : +
Note : PFAM: transposase IS66; KEGG: tmz:Tmz1t_0278 transposase IS66

DNA sequence :
ATGGTCGACAAGCTGAAGCTGCAGTTGCTGCGCAGCCTTCGGGCGCGGTTCGGATCGTCCAGCGAGCAACTCGATGATCC
TCAGATCGCTCTTCTGGAAGGCGAACCACTGTATGAACGTCCGGCGCCGATCGCTGTGGCTGTGCCAGATGCTGCGAACG
CACCACAGATCGATCGCAAGCTCCCCGCACACCTGCCGCGAGAGACCCAGGTCTATCGACCGGAGACCACCTGCGATCAC
CATGATGCCAATGACCAAGCCTGTGGCTGCATAGCCTGCGGCGGCCGTCTGCGTCTCATCGGGCACGACGTCTCGGAGCA
ACTGGAGTACGTGCCCTCGCGCTTCAAGGTGATTCGGCATGTGCGACCCAAGCTCGCGTGCGTTGCCTGCGAAGCGATCT
TCCAGGCACCTGCACCGAGCCGGCCGATTGCACGCGGCATGGCCGGCCCTGGACTGCTTGCCAACGTGCTGGTGTCCAAG
TACTGCGACCACATTCCGTTGCATCGCCTGAGCCGCATCTATGGCCGCGACGGCGTCGTCATCGATCCTTCGACCATGGC
CGGCTGGGTAGGCCAGAGCGAGAAGCTGTTCGATCCGCTGGTGGCCGCGCTCGAACGCTACACGCTGGCCGGCGAGAAGG
TGCATGCCGATGACACGCCGGTGGCCGTGCTCGATCCCGGCCGCGGCCGCACCAAGACGGGCCGGCTGTGGGTGTACGTG
CGCGACGACCGGCCTGCAGGAAACATGCAACCGCCCGCGGCTTGGTATCGCTACTCGCCCAACCGCAAGGGCGAGCATCC
GCAAGCACATCTTGCGAACTACAGCGGCATCCTCCAAGCCGATGCCTATGGCGGGTACGGAAAGATCTACGCAAGTGGGC
GTGTAGTCGAAGCATCTTGCTGGGCGCACGCGCGCAGACCCTTCTGGGATCTGCACGAGAGCCAGGGCTTCGTACCGGGC
TCGATTGCCGAGCAAGCGCTGCAGCGGATTGCGGCGCTGTACGCCATCGAAGCCCAGATCCGGGGTCAACCCCCCGACGT
GAGACGCCAGGTAAGACAAGCCCGCGCCGGGCCGCTGTTGGATGACCTGCGTGCTTGGCTCACGAGCATGCTGGGCAAGG
TCTCCAGGAAGTCGGAACTGGCCAAGGCGATCGGCTATTCGCTCACGCGCTGGACATCGCTGACCCGCTACCGTGACGAT
GGCCGCATCGAGATCGACAACAACGCGGCTGAGCGCGCCCTGCGCGGTGTGGCCCTTGGCAGATCCAACTATCTCTTCAT
GGGTTCGGACGCCGGAGGCGAGCGGGCCGCGGCGATTTACAGTCTGGTGGAAACGGCCAAGCTGAACGGGCTCGATCCGC
AGGCGTATCTGCGCGATGTGCTCGCACGCATTGCCGACCATCCGATCAATCGCATCGACGAGTTGCTTCCGTGGAACATC
GGCGGGCACCGCGTTGAGCAACGACTGGCAGCCTGA

Protein sequence :
MVDKLKLQLLRSLRARFGSSSEQLDDPQIALLEGEPLYERPAPIAVAVPDAANAPQIDRKLPAHLPRETQVYRPETTCDH
HDANDQACGCIACGGRLRLIGHDVSEQLEYVPSRFKVIRHVRPKLACVACEAIFQAPAPSRPIARGMAGPGLLANVLVSK
YCDHIPLHRLSRIYGRDGVVIDPSTMAGWVGQSEKLFDPLVAALERYTLAGEKVHADDTPVAVLDPGRGRTKTGRLWVYV
RDDRPAGNMQPPAAWYRYSPNRKGEHPQAHLANYSGILQADAYGGYGKIYASGRVVEASCWAHARRPFWDLHESQGFVPG
SIAEQALQRIAALYAIEAQIRGQPPDVRRQVRQARAGPLLDDLRAWLTSMLGKVSRKSELAKAIGYSLTRWTSLTRYRDD
GRIEIDNNAAERALRGVALGRSNYLFMGSDAGGERAAAIYSLVETAKLNGLDPQAYLRDVLARIADHPINRIDELLPWNI
GGHRVEQRLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-123 60
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-104 58
tnp AEA34686.1 transposase Not tested Not named Protein 2e-113 55
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 5e-89 54
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-111 54
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-111 54
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-112 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-112 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-112 54
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-112 54
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-112 54
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-112 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-111 54
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 7e-112 54
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-112 54
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 8e-103 53
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 6e-104 51
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 4e-105 50
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 4e-105 50
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-89 49
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-89 49
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 3e-68 44
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 5e-77 43
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 3e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_0665 YP_002942589.1 transposase IS66 VFG1700 Protein 3e-104 58
Vapar_0665 YP_002942589.1 transposase IS66 VFG1513 Protein 3e-89 54
Vapar_0665 YP_002942589.1 transposase IS66 VFG0793 Protein 1e-112 54
Vapar_0665 YP_002942589.1 transposase IS66 VFG1736 Protein 2e-79 48