Gene Information

Name : Vapar_4990 (Vapar_4990)
Accession : YP_002946859.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5302110 - 5302802 bp
Length : 693 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: aav:Aave_0359 two component transcriptional regulator

DNA sequence : 
ATGCCATCGCCCACCGCCATCGTGATCGAGGACGAGCCGCAGATCCGCCGCTTCGTGCGCGGCGCGCTCGAGGCCGAGGG
CTGGCTGGTGCACGAGGCCGGCACGCTGCGCGAGGGCCTGGCGGCGGCCGGCACGCGCCAGCCCGACCTGCTGGTGCTCG
ACCTCGGCCTGCCCGATGGCGACGGCGTGTCGCTGATCCGCGATGTGCGCGGCTGGTCGGCCGTGCCGATCATCGTGCTG
TCCGCGCGCAGCGACGAGGCCGACAAGATCGCCGCGCTCGATGCCGGCGCCGACGACTACCTGACCAAGCCCTTCGGCAC
CGGCGAACTGCTCGCGCGCGTGCGCGCCAACCTGCGCCGGCCACGCGCGGCGGGCGGCGACGAAGCGGCAGAAGCGGTGT
TCCGCTTCGGCGAGGTCGAGCTGGACCGCGCCGCGCGCATCGTGCGCCGGGCCGGCGCCGAGGTGCATCTGACGCCGACC
GAGTACCGGTTGCTGTCAGTGCTCGTCGCCAACGCCGGCCGCGTGCTCACGCAGCGCCAGCTTCTGCGCGAGGTGTGGGG
GCCGTCGCACACGGACCAGAGCCACTATCTGCGCATCTACATGGGGCATCTGCGGCAGAAGCTGGAAGCGGATCCGGCGC
AGCCGCGGCATTTGTTGACGGAGACTGCGGTGGGGTATCGGCTGGTGGTTTAG

Protein sequence : 
MPSPTAIVIEDEPQIRRFVRGALEAEGWLVHEAGTLREGLAAAGTRQPDLLVLDLGLPDGDGVSLIRDVRGWSAVPIIVL
SARSDEADKIAALDAGADDYLTKPFGTGELLARVRANLRRPRAAGGDEAAEAVFRFGEVELDRAARIVRRAGAEVHLTPT
EYRLLSVLVANAGRVLTQRQLLREVWGPSHTDQSHYLRIYMGHLRQKLEADPAQPRHLLTETAVGYRLVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 9e-32 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-32 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_4990 YP_002946859.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-29 42