Gene Information

Name : Vapar_4983 (Vapar_4983)
Accession : YP_002946853.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5295685 - 5296341 bp
Length : 657 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rme:Rmet_5326 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGTGTGCTGCTGGTGGAAGACGACGAGATGATCGGGCGCAGCCTGAAGCAGGCGCTCGAGGGCGCGGGCTGGTCGGC
CGACTGGGTGCGCGACGGCGAACTGGCGCAAAGCGCGCTCGGCGACGGCGGCTACACCTGCGTGCTGCTCGACCTGGGCC
TGCCGCGGCAGGACGGCACCGAGGTGCTGCGCCGCGCGCGCGAACGCGGCGACGCCACGCCGGTGCTGGTGCTCACCGCG
CGCGACGGGCTGGACGACCGCATCCACAGCCTCGACCTGGGCGCCGACGACTATCTGCTCAAGCCCTTCGAATTCCGCGA
GCTGCTCGCGCGCATGCGGGCCGTCGTGCGCCGGCGCGACGGCGCCGCGCATTCGCTGATCGGCGGCAGCACGATGCAGC
TGGACCTCACCACGCGCGAGGTGCTGGTCGATGGCGTGCGCGAGGCGCTCACCGCACGCGAGTTCGCGCTGCTGCACGCC
CTGCTCGAGCGGCCCGGCGCCATCCTCTCGCGCGAGCAGCTCGAGAACCGCATCTACGGCTGGGGCGAAGAGGTGACCAG
CAACGCCATCGACGTGCTGATCCACGGCATGCGCCGCAAGCTCGGCGCCGATTCGATCCGCAACGTGCGCGGGCTCGGCT
GGCGCGTCGCCGCATGA

Protein sequence : 
MRVLLVEDDEMIGRSLKQALEGAGWSADWVRDGELAQSALGDGGYTCVLLDLGLPRQDGTEVLRRARERGDATPVLVLTA
RDGLDDRIHSLDLGADDYLLKPFEFRELLARMRAVVRRRDGAAHSLIGGSTMQLDLTTREVLVDGVREALTAREFALLHA
LLERPGAILSREQLENRIYGWGEEVTSNAIDVLIHGMRRKLGADSIRNVRGLGWRVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_4983 YP_002946853.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-31 44
Vapar_4983 YP_002946853.1 winged helix family two component transcriptional regulator BAC0197 Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_4983 YP_002946853.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-32 42