Name : Vapar_4495 (Vapar_4495) Accession : YP_002946372.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 4743621 - 4744850 bp Length : 1230 bp Strand : + Note : PFAM: integrase family protein; KEGG: har:HEAR0701 integrase DNA sequence : ATGGCACTGACAGACACGTTTGTTAGGCAGGTGAAGCCCACCGGGAAGGCCAACGGCGACAAATATGCCGACGGCGCCGG CATGTACCTGCTGGTGAAGACTGCCGGGAAATACTGGCGAATGGATTACACCTTCGCCGGCAAGCGGAAAACGCTGGCGC TGGGGACCTACCCGGAGGTCTCGCTGGCCAAAGCCCGGGATCGCCGCGCCGCCGCCCGCGAGCTGCTGGCGGACGGGACC GACCCGAGCGCGGCCAAGCGCGAAGAAAAGAGAGCCCGAGCCGACGCGGCGGCGAATACGTTCGAGGCGGTTGCGCGCGA GTGGCTGGGAAAGACCGCGGCCAAACGAGCGAGTGGAACGCAGCTCAAGGTCAAGACATGGCTCGAGAAGGACGTGTTCC CCTTCATCGGCAAGATGCCCATCTCCACCATCGGTCCGCGCGACATTCTGGAGCGGGTGGTCCGCAAGCTGGAAGCACGC GGCGCCATCGATACCGCCCATCGCGTCAAGCAGCTTTGCGGGCAGGTGTTTCGCTTCGCAGTGGTGTCAGGACTGGCAGA GAGGGACGTGACCGCCGATCTGAGCGAAGCTCTGGCCTCGAAAGCGACCAGGCACTTCGCCGCCATCACCGAGCCCAAGA GAGTCGGCGACCTGATGCGCTCGATCCATGCCTACAGCGGCCACCCCACCACCGTTGCCGCGCTGAAGCTTTCCCCTCTG CTGTTTGTCCGGCCCGGCGAGTTGCGCACCGCGGAATGGGCCGAGATCGACCTGGACGCGGCCGAGTGGCGCATCGCCGG CCCGAAGATGAAAATGAAGGTCGATCATGTCGTGCCGCTCGCAACCCAGGCGGTGGAGATCCTGCGCGACCTCCACCCAA TCACAGGGCATGGACGGTTTGTGTTTCCGAGCATACGGACGGGTGAACGCCCCATGAGCGAGAACACCATCAATGCCGCC CTGCGTGGAATGGGCTACAGCGCCGAAGTCCACACGGCTCACGGCTTCAGGGCAACCGCGCGGACCATCATGGATGAGGT GCTTGGCGAGCGCGTGGACTTCATCGAGCACCAGCTCTCCCACATGGTCAGGGATACCAACGGTCGTGCGTACAACCGCA CTGCGCATCTCCCCGCGCGCCGGGAAATGATGCAGCGCTGGGCGGACTACCTGGACAAGCTGCGCATCGGTGCCGACCTG ATTCCGTTGAAGCCGCGCCAGATGACATAG Protein sequence : MALTDTFVRQVKPTGKANGDKYADGAGMYLLVKTAGKYWRMDYTFAGKRKTLALGTYPEVSLAKARDRRAAARELLADGT DPSAAKREEKRARADAAANTFEAVAREWLGKTAAKRASGTQLKVKTWLEKDVFPFIGKMPISTIGPRDILERVVRKLEAR GAIDTAHRVKQLCGQVFRFAVVSGLAERDVTADLSEALASKATRHFAAITEPKRVGDLMRSIHAYSGHPTTVAALKLSPL LFVRPGELRTAEWAEIDLDAAEWRIAGPKMKMKVDHVVPLATQAVEILRDLHPITGHGRFVFPSIRTGERPMSENTINAA LRGMGYSAEVHTAHGFRATARTIMDEVLGERVDFIEHQLSHMVRDTNGRAYNRTAHLPARREMMQRWADYLDKLRIGADL IPLKPRQMT |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 1e-63 | 44 |
int | CAC39282.1 | integrase | Not tested | LPA | Protein | 6e-64 | 44 |
aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 5e-64 | 44 |
ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 3e-63 | 43 |
int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-63 | 43 |
int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-63 | 43 |
intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 3e-63 | 43 |
int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 5e-62 | 43 |
S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 7e-62 | 43 |
SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 7e-62 | 43 |
unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 6e-63 | 41 |
APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 3e-55 | 41 |
c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 3e-55 | 41 |
ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 2e-55 | 41 |
int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 2e-54 | 41 |
int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-54 | 41 |
ECUMN_3322 | YP_002414004.1 | integrase | Not tested | Not named | Protein | 3e-54 | 41 |
int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 7e-55 | 41 |
int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 7e-55 | 41 |
SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-59 | 41 |
SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-59 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Vapar_4495 | YP_002946372.1 | integrase family protein | VFG0783 | Protein | 1e-63 | 43 |
Vapar_4495 | YP_002946372.1 | integrase family protein | VFG0598 | Protein | 3e-62 | 43 |