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Name : Vapar_3589 (Vapar_3589) Accession : YP_002945472.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3791082 - 3793739 bp Length : 2658 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : GTGAAAACGACGACCGCGCAACCCTCCCCCTCCACCAGCGACTTCTCCGGGCATACGCCCATGATGGCGCAGTACCTGGG CCTCAAGGCGAACCATCCGGACACCCTGCTGTTCTACCGGATGGGCGATTTCTACGAGCTGTTCTGGGCCGACGCCGAAA AGGCCGCGCGCCTGCTCGACATCACGCTCACCCAGCGCGGCCAGTCGGCCGGCCAGCCCGTGGTGATGTGCGGCGTGCCC TTCCATGCGGTCGACACCTATCTTGCGCGGCTCATCAAGCTGGGCGAATCGGTGGCCATCTGCGAGCAGGTGGGCGAAGT CGGCGCGAGCAAGGGCCCGGTCGAGCGCAAGGTGGTGCGGGTGGTCACGCCCGGCACGCTGACCGATTCGGAACTGCTCA ACGACAAGAGCGAATCGCTGCTGCTCGCAGTGCATGCGGGCACGCGCAACTTCTGCGGCCTGGCCTGGCTCAGCGTGACC GGCGCGGAGCTGCGGCTGGCCGAATGCCCGGCCGATGCGCTCGAAGCCTGGATCGCGCGCATCGCGCCGAGCGAGCTGCT CTACAGCGCCGAGGTGACGCCGGCCTTCGAGCAGCGCCTGAAGGCCGCGCGCGCGGCCACGCCCTTCACGCTCTCGATCC GCCCCGCGTGGCAGTTCGACGGCGGCCTGGGCGAGCGCAAGCTCAGCGAGCAGATGGGCAGCAACAGCCTCGCGGCCTGG AACGCCGAATCGCTCGCCAACGCGCATGCCGCCGCGGCCGCGCTGCTGGGCTATGCCGAGCACACGCAGGGCCGCGCGCT GTCGCATGTGCAGCGCCTGTCGGTGGAGCGCGACGGCGACCTGGTCGAGTTGCCGCCCACCACGCGGCGCAACCTCGAAC TGGTGCAGACATTGCGCGGCGAAGACTCGCCCACGCTGTTCTCGCTGCTCGACACCTGCATGACGGGCATGGGCAGCCGG CTGCTCAAGCGCTGGCTGCTGTCGCCCCGGCGCGACCGCGGCGAGGCGCAGGCCCGGCTCGAAGCCATTGCGGCGCTCCA GTCCACGGTGCTGGGCGGCACCGCCGCGCCCTGGCGCACCTTGCGCGAACAGCTCAAGAACACCAGCGACGTGGAACGCA TCGCGGCGCGCATCGCGCTCAGGCAGGTGCGCCCGCGCGAACTGCTCGCGCTGCGCCTCGCGCTTGCAAAGGCCGAGCAG CTGGCCCCGGCGCTTCCGGCGTCCGGCGAACTGCTGGGCGGCATCATCGAACGGCTCGCGCCGCCGTCGGGCTGCGCCGA CCTGCTGGCGAGTGCGATCAAGCCCGACCCCTCGGCGCTGGTGCGCGACGGCGGCGTGATCGCCACCGGCCACGACGCCG AACTCGACGAGCTGCGCGCGATCAGCGAGAACTGCGACGATTTTTTGCTGAAGCTCGAAGTCAGCGAACGCGAGCGCACC GGCATCAGCAACCTGCGGGTGCAGTTCAACCGCGTGCACGGCTTCTACATCGAGGTCACGCAAAGCGCGCTCTCCAAGGT GCCCGACAACTACCGCCGCCGCCAGACGCTGAAGAATGCCGAGCGCTTCATCACGCCCGAGCTCAAGGCCTTCGAGGACA AGGCGCTGAGCGCGCAGGACCGGGCCCTTGCCCGTGAGAAGTGGCTCTACGAGCAATTGCTCGACGCGCTGCAGCCCTCG GTGCCCGCGCTCACGCAGCTGGCCGGCGCCATTGCCACGCTCGATGCGCTGTGCGCGCTGGCCGAGCGCTCGCACACGCT GCACTGGCGCGCGCCGAGCTTCGTCTCGCACCCCTGCATCGAGATCCAGCAGGGCCGCCATCCGGTGGTGGAGGCGCGGC TGGCCGAAAAATCGTCGGGCGGCTTCATCGCCAACGACACGCAGCTCGGGCCGCAGCAGCGCATGCAGGTGATCACCGGC CCCAACATGGGCGGTAAGTCAACCTACATGCGGCAGGTGGCGATCATCGTGCTCCTGGCTTCCATCGGCTCGCACGTGCC GGCGGCGGCCTGCCGGCTCGGGCCGATCGACGCCATCCACACCCGCATCGGTGCCGCGGACGACCTGGCCAACGCGCAGT CGACCTTCATGCTCGAGATGACCGAGGCCGCGCAAATTTTGCACAGCGCCACCGCCCAGTCGCTGGTGCTGATGGACGAG ATCGGCCGCGGCACCAGCACCTTCGACGGCCTGGCGCTGGCCGCGGGCATCGCGGCCCAGCTGCACGACCGCAGCAAGGC CTTCACGCTCTTTGCCACCCACTACTTCGAGCTGACCGAATTCCCGGCCACGCACCACTGCGCCGTGAACATGCATGTGA GCGCCACCGAGGCGGGCCGCGACATCGTGTTCCTGCACGAAATGCAGCCCGGCCCGGCCAGCAAGAGCTACGGCATCCAG GTGGCGCGGCTCGCCGGCATGCCGGCCGCAGTGGTCAACCACGCGCGGCAGGCGCTCGAGGCGCTCGAGTCGCAACACGC CCAGACGCGCGCGCAGGTCGACCTGTTCGCCCCGCCCCCGGCGGCCGAAACGCCGATGGCCAGCGCCGTAGAATCCGCCC TGGCCGCGCTCGATCCTGATGCGATGACGCCACGGGAGGCGCTCGACGCGCTCTATGCCTTACAAAAACTGAACACGCGC GAACGCGGCGCCGCGTAG Protein sequence : MKTTTAQPSPSTSDFSGHTPMMAQYLGLKANHPDTLLFYRMGDFYELFWADAEKAARLLDITLTQRGQSAGQPVVMCGVP FHAVDTYLARLIKLGESVAICEQVGEVGASKGPVERKVVRVVTPGTLTDSELLNDKSESLLLAVHAGTRNFCGLAWLSVT GAELRLAECPADALEAWIARIAPSELLYSAEVTPAFEQRLKAARAATPFTLSIRPAWQFDGGLGERKLSEQMGSNSLAAW NAESLANAHAAAAALLGYAEHTQGRALSHVQRLSVERDGDLVELPPTTRRNLELVQTLRGEDSPTLFSLLDTCMTGMGSR LLKRWLLSPRRDRGEAQARLEAIAALQSTVLGGTAAPWRTLREQLKNTSDVERIAARIALRQVRPRELLALRLALAKAEQ LAPALPASGELLGGIIERLAPPSGCADLLASAIKPDPSALVRDGGVIATGHDAELDELRAISENCDDFLLKLEVSERERT GISNLRVQFNRVHGFYIEVTQSALSKVPDNYRRRQTLKNAERFITPELKAFEDKALSAQDRALAREKWLYEQLLDALQPS VPALTQLAGAIATLDALCALAERSHTLHWRAPSFVSHPCIEIQQGRHPVVEARLAEKSSGGFIANDTQLGPQQRMQVITG PNMGGKSTYMRQVAIIVLLASIGSHVPAAACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHSATAQSLVLMDE IGRGTSTFDGLALAAGIAAQLHDRSKAFTLFATHYFELTEFPATHHCAVNMHVSATEAGRDIVFLHEMQPGPASKSYGIQ VARLAGMPAAVVNHARQALEALESQHAQTRAQVDLFAPPPAAETPMASAVESALAALDPDAMTPREALDALYALQKLNTR ERGAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 5e-165 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Vapar_3589 | YP_002945472.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 5e-177 | 49 |
