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Name : Vapar_3562 (Vapar_3562) Accession : YP_002945445.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 3759388 - 3761676 bp Length : 2289 bp Strand : - Note : TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehal DNA sequence : ATGGGATTCATGACGAACCAGAATGCCCTGAAACCGATGGCGCCGCATGCCCACTCCCATGCGCCGGCCGCTCCCGAAAC GGCCTGCTGCGGCAGCACGGCCTGCGGCTCGCCGGCCGTTGCCGTGGCCGCTGCCGACATTCCGAAGGGCGCCTTGCTCT TTCGCATTCCCACGATGGACTGCGCGGTCGAAGAGTCCGAGATCCGGCGCGCGCTCGAGCCGGTCGCGGGTGTGCGGGGG CTGCGCTTTCGGCTCGGTGAACGCACCATGGCCATCACGGCCGACGAAGGCGCCTTGCCCGGTGCGCTCGACGCCATCCG CAAGGCGGGCTTCAAGCCCGAACCGCTGAACGGCGCGGCAGGCAGCCCGGCCGATGGTGCGCAGCCGGTGGCAGCCTCTG CAGGCATCGCGGGCATGAGCAGCGGCCTCGTGCGCCTCGTTGCCGCGCTGGTGCTCGCCATCGCGGCCGAGGCCGTTGCC TTTCTCGCACCGGAGGGCGCCGGGTCCATGGCGGCGGAGATGGGGCTCGCGCTCGCGGCCATCGCACTGGCCGGCCTCGA CACTTACAAGAAGGGCTTTGCCGCGCTGCTGCGCGGGCGCCTGAACATCAACGCGCTGATGGCCGTGGCGGTCACGGGCG CCTTCCTGATCGGGCAATGGCCCGAGGCCGCGATGGTGATGGCGCTCTATGCCATTGCCGAGCTGATCGAGGCGCGCGCC GTCGATCGCGCGCGCAACGCCATCCAGGGCCTGCTGGCGCTGACGCCCGAACTGGCCGAGGTCAGGCAGCCCGATGGCCG CTGGAAGACGGAGAAGGCCGATGCGGTGGCGCTCGATGCCGTCGTGCGCATCCGGCCCGGCGAACGCGTGCCGCTGGACG GCGTGGTGACCGAAGGGGCGAGCGCCATCGACCAGGCGCCGGTCACGGGCGAGAGCATTCCGGTCGACAAGGCGGTGGGA GACGCGGTGTTCGCAGGCACCATCAACCAGACGGCCGCGCTCGAATTCCGCGTCACCGCGGTGGCGGCCAACACCACGCT CGCGCGCATCATCCATGCGGTCGAAGAGGCGCAGGGCACGCGCGCGCCCACGCAGCGCTTCGTCGACCGGTTCGCGGCCG TCTACACGCCCGCGGTCTTCGTGCTGGCCATTGCCGTGGCGCTGCTCACGCCCTGGCTCATGGGCTGGAGCTGGACCGAG GCCATCTACAAGGCGCTGGTGCTGCTGGTCATTGCGTGCCCGTGCGCGCTGGTCATCTCGACGCCCGTCACGGTGGTGAG CGCGCTGGCCTCGGCCGCGCGGCGCGGCATCCTGATCAAGGGCGGCACCTATCTCGAAGAGGCGCGCAGGCTCAAGGCCG TGGCACTCGACAAGACCGGCACCATCACCGAAGGCAAGCCGAAGCTGGTCGCATCGCGCCTGCTCGACCCCGCGGCGGAT GAAGCCGCGATCTTTGCCATTGCCGCGAGCATCGCGGGCCGCTCCGACCATCCGGTGTCGAAGGCCATTGCCGACGGGCT GAACCGCGAGCACCAGCCGGTCGGCGGCTTCACGGCCTTGCCCGGACGCGGCGTGCAGGCCGTGCACGAAGGCCGCAGCT ATGTGCTTGGCAACCACCGCCTGATCGAAGAGCAGGGGCTGTGCAGCCCCGCGCTCGAAGCCGAGCTGAAGCAGCATGAG GAAGCGGGGCGCACCGTCACGCTGCTGGCCTCCGGCCAGGCCGTGCTGGCGCTGTTCGCGGTGGCCGACACCATCAAGCC CTCTTCGAAGGCCGCCATGGCCGAGCTGCGCGCGCTGGGCGTCACGCCCGTGATGCTGACCGGCGACAACGCCGCCACGG CCAGGGCGATCGGCCTGCACGCGGGCATCGACGACGTGCGCGGCAACCTGCTGCCCGAGGAGAAGCTCGATGCCATCAAG ACGCTGCAGCAGCGCCACGGCATGGCCGGCATGGCGGGCGACGGCATCAACGATGCGCCCGCGCTTGCGCAGGCCGACAT CGGCTTTGCGATGGGCGGCGCCGGCACCGACACCGCCATGGAAGCGGCCGACGTGGTCATCATGAACGACGACCTGCGGC GCCTGCCCGAAACCATCCGCCTCTCGCGCCATGCGCATGCGGTGCTGTGGCAGAACATCACGCTCGCGCTCGGCATCAAG GCCGTGTTCTTCGTGCTCGCGGTGTTCGGCAGCGCCACCATGTGGATGGCGGTGTTTGCCGACATGGGCGCCAGCCTGCT GGTGGTGGCCAACGGATTGCGGCTGATGCGCGCACCGAAGGGCGGCTGA Protein sequence : MGFMTNQNALKPMAPHAHSHAPAAPETACCGSTACGSPAVAVAAADIPKGALLFRIPTMDCAVEESEIRRALEPVAGVRG LRFRLGERTMAITADEGALPGALDAIRKAGFKPEPLNGAAGSPADGAQPVAASAGIAGMSSGLVRLVAALVLAIAAEAVA FLAPEGAGSMAAEMGLALAAIALAGLDTYKKGFAALLRGRLNINALMAVAVTGAFLIGQWPEAAMVMALYAIAELIEARA VDRARNAIQGLLALTPELAEVRQPDGRWKTEKADAVALDAVVRIRPGERVPLDGVVTEGASAIDQAPVTGESIPVDKAVG DAVFAGTINQTAALEFRVTAVAANTTLARIIHAVEEAQGTRAPTQRFVDRFAAVYTPAVFVLAIAVALLTPWLMGWSWTE AIYKALVLLVIACPCALVISTPVTVVSALASAARRGILIKGGTYLEEARRLKAVALDKTGTITEGKPKLVASRLLDPAAD EAAIFAIAASIAGRSDHPVSKAIADGLNREHQPVGGFTALPGRGVQAVHEGRSYVLGNHRLIEEQGLCSPALEAELKQHE EAGRTVTLLASGQAVLALFAVADTIKPSSKAAMAELRALGVTPVMLTGDNAATARAIGLHAGIDDVRGNLLPEEKLDAIK TLQQRHGMAGMAGDGINDAPALAQADIGFAMGGAGTDTAMEAADVVIMNDDLRRLPETIRLSRHAHAVLWQNITLALGIK AVFFVLAVFGSATMWMAVFADMGASLLVVANGLRLMRAPKGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-118 | 45 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-118 | 45 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 3e-116 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Vapar_3562 | YP_002945445.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 2e-153 | 62 |
| Vapar_3562 | YP_002945445.1 | heavy metal translocating P-type ATPase | BAC0461 | Protein | 6e-79 | 42 |
