Gene Information

Name : Vapar_3469 (Vapar_3469)
Accession : YP_002945352.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3653699 - 3654349 bp
Length : 651 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dia:Dtpsy_2458 ABC transporter

DNA sequence : 
ATGACCCTGCGCATTTCCGGGCTCGCCAAGCACTACGGCGACGTGCCCGTCTTCGAGAACGTGACGCTCGGCGTCGAGCC
CGGCGAGTTCGTTGCCATCGTGGGCGAATCGGGCGTCGGCAAGTCGACGCTGCTCAACTGCATGGCCGGGCTCGACAGCT
GGGACGCGGGTACGGTCACGCACGGCGGCATCGACATCGGCGCACTCGACGGCGAAGCCTGCGCGCTCTGGCGCCGGCGC
CACGTGGGCTTCGTGTTCCAGGCCTTCCACGTGCTGCCGCACCTGGACGTGGCGCAGAACGTCTCGCTGCCGCTGATGCT
GCTGGGCGGCAAGCGCGATGAAGGCCGCGTCGCGCACATGCTCGATGCGGTGGGCCTGCCCGGCATGGGCGCGCGGCTGC
CGCAGACGCTCTCTGGCGGCCAGCTGCAGCGCGTGGCAATCGCGCGCGCGCTGGTGCACCGGCCCGCCCTGCTGCTGGCC
GACGAGCCCACCGGCAACCTCGACCCGGGCACCGCTTCGAAGGTGATGGAACTGCTGATCGGCCAGACGCGCGAGCACGG
CGCTTCGCTGGTGCTGGTGACGCATTCCGAGAGCGCGGCAGCCCGTGCGGACCGCCTGCTGCACCTCACGGCCGAGGGAA
TACGCGCCTGA

Protein sequence : 
MTLRISGLAKHYGDVPVFENVTLGVEPGEFVAIVGESGVGKSTLLNCMAGLDSWDAGTVTHGGIDIGALDGEACALWRRR
HVGFVFQAFHVLPHLDVAQNVSLPLMLLGGKRDEGRVAHMLDAVGLPGMGARLPQTLSGGQLQRVAIARALVHRPALLLA
DEPTGNLDPGTASKVMELLIGQTREHGASLVLVTHSESAAARADRLLHLTAEGIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_3469 YP_002945352.1 ABC transporter NC_012469.1.7686878. Protein 3e-33 45
Vapar_3469 YP_002945352.1 ABC transporter CP001581.1.gene798.p Protein 3e-38 44
Vapar_3469 YP_002945352.1 ABC transporter NC_008702.1.4606598. Protein 1e-32 44
Vapar_3469 YP_002945352.1 ABC transporter CP001581.1.gene598.p Protein 2e-38 41