Gene Information

Name : Vapar_3458 (Vapar_3458)
Accession : YP_002945341.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3642181 - 3643092 bp
Length : 912 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: pol:Bpro_3191 tyrosine recombinase XerD subunit

DNA sequence :
ATGACAGAGGCCGCCGCCACGCAAACTCCCGAGATCGACGACTTCATCGATGCCCTCTGGCTCGAGGACGGGCTGTCGAA
GAACACGCTGGCCGCCTACCGCCGCGACCTCGCGCTGTTCGCGCAGTGGCTGGGCAGCCAGCGCAGCGGCCGCGCGCTCG
ACACGGCGCAGGAGTCCGACCTGCAGGCTTACATGGGCGCGCGCCTGTCGACCCGGGGCAAGGCCACCTCGGCCAACCGG
CGGCTCACGGTGTTCAAGCGCTACTATCGCTGGGCGCTGCGCGAGCGCCGCATCGCAGCCGATCCGAGCATCCGGCTCGC
GCCCGCGCGGCAGATGCCGCGGGCCATCAAGACGCTGTCGGAAAAGCAGGTGGACGATCTGCTGGCCGCACCCGACGTCG
AAACCCCGCTCGGCCTGCGCGACCGCGCGATGCTCGAGCTGATGTATGCGAGCGGCCTGCGCGTGAGCGAGCTGGTGGCG
CTCAAGGTCATCGACATGAGCCTCAACGACGGCGTGCTGCGCGTGCTCGGCAAGGGCAGCAAGGAGCGCCTCGTGCCCTT
CGGCGGCGAGGCGCGGCGCTGGATCGAGCGCTACCTGGACGAGTCGCGCCCCACCATCCTCGACGGGCAGCAGACGCCCG
ACCTGTTCGTGACCGCGCGCGGCGCAGGCATGACGCGCGTGATGTTCTGGATCATCGTGAAGAAGCAGGCCGCCGCGGCC
GGCATCCATGTGCCGCTGTCGCCGCACACGCTGCGCCACGCCTTCGCCACGCACCTGCTGAACCGCGGCGTGGACCTGCG
CGCGGTGCAATTGCTGCTCGGCCATGCCGACATCTCCACGACCACCATCTACACCCACGTGGCGCGTGAACGGCTCAAGC
AGCTGCACGCGCAGCACCATCCGCGTGGCTGA

Protein sequence :
MTEAAATQTPEIDDFIDALWLEDGLSKNTLAAYRRDLALFAQWLGSQRSGRALDTAQESDLQAYMGARLSTRGKATSANR
RLTVFKRYYRWALRERRIAADPSIRLAPARQMPRAIKTLSEKQVDDLLAAPDVETPLGLRDRAMLELMYASGLRVSELVA
LKVIDMSLNDGVLRVLGKGSKERLVPFGGEARRWIERYLDESRPTILDGQQTPDLFVTARGAGMTRVMFWIIVKKQAAAA
GIHVPLSPHTLRHAFATHLLNRGVDLRAVQLLLGHADISTTTIYTHVARERLKQLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 52