Gene Information

Name : Vapar_3308 (Vapar_3308)
Accession : YP_002945192.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3486182 - 3486931 bp
Length : 750 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: lch:Lcho_4270 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCTGCTCAAGGACAAGATCGTCGTCATTACCGGCGGCGCCGGCGTCAACGGCCTCGGGTTCGCCACGGCGCGCCTGAT
GGCGGCCCATGGCGCCCGTGTCGCGGTGCTCGACCTGGAGCGCGCCGCCCCTGCGGCGGCGGCCGCGCAACTCGGCCCCG
CGCATCTTGGAATCGTTGCCGACGTGACCGACAAGGCCTCGTGCGATGCCGCCGCCGCGACTGTGCTGAAGGCATTCGGC
CGCATCGACACGCTGGTCAACAACGCAGGCATCACACAGCCGGTCAAGACGCTCGAGATCAGCGGTGCGGACTATGACCG
CATCCTCGACGTCAGCCTGCGGGGCACGCTGTACATGTCGCAGGCGGTTCTGCCTTCCATGCAGCAACAGGGCGGCGGAT
CGATCGTCTGCATCTCGTCGGTTTCCGCGCAGCGCGGCGGGGGCATCCTGGGCGGTCCGCACTACTCGGCGGCCAAGGCC
GGCGTGCTTGGCCTGGCACGCGCCATGGCGCGGGAGTTCGGCCCCGAAGGCATCCGGATCAACAGCATCACGCCCGGCCT
GATCGGCACCGACATCATCAAGGGCAGGCTCACCGAAGAGAAAAAGGCCGAGATCGCCGAGACCATTCCGCTCGGCCGGC
TGGGCCGCGCCAACGACATCGCCGGCGCCTGCGTCTTCCTTGCCAGCGATCTGTCGCTGTACTGCACGGGGATCACGCTC
GACGTGAATGGCGGCATGTTGATCCATTGA

Protein sequence : 
MLLKDKIVVITGGAGVNGLGFATARLMAAHGARVAVLDLERAAPAAAAAQLGPAHLGIVADVTDKASCDAAAATVLKAFG
RIDTLVNNAGITQPVKTLEISGADYDRILDVSLRGTLYMSQAVLPSMQQQGGGSIVCISSVSAQRGGGILGGPHYSAAKA
GVLGLARAMAREFGPEGIRINSITPGLIGTDIIKGRLTEEKKAEIAETIPLGRLGRANDIAGACVFLASDLSLYCTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-71 68
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-70 67
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-70 66
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-70 66
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-70 66