Gene Information

Name : Vapar_3288 (Vapar_3288)
Accession : YP_002945172.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3462019 - 3462801 bp
Length : 783 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_3017 short chain dehydrogenase

DNA sequence :
ATGGCTTACAGCATCGATCTTTCGGGCCGCGTGGCCTTCATCACCGGCGCTTCCAGCGGGCTGGGCGCGCAGTTTGCCAA
GACGCTGGCGCGTGCCGGCGCCGCGGTGGTGCTCGCGAGCCGCCGGCTCGAGAAACTGAAGGAGCTGCGCGCCCGCATCG
AGGGCGAGGGCGGCGACGCGCATGCGGTCGAGCTCGACGTCACCGACATCGGCAGCATCAAGGCCGCGGTGGCGCGCGCC
GAAACCGAGGTCGGCCCCATCGACATCCTGGTCAACAACTCGGGCGTGAGCACCACCCAGCGCCTTTCGGACGTCACGCC
GGACGACTACGACTACATCTTCGACACCAACGTGAAGGGCTCCTTCTTCGTCGCACAGGAGGTGGGCAAGCGCATGCTGG
CGCGCGCCGACGGTTCGGCGCCGGGCACCTACATCGGCGGGCGCATCATCAACATCGCCTCGGTGGCGGCGCTCAAGGTG
CTGCCGCAGATCGGCACCTACTGCATGAGCAAGGCCGCGGTCGTGCAGATGACCAAAGCCATGGCGCTCGAATGGGGCCG
CTTCGGCATCAACGTGAACGCGCTGTGCCCGGGCTACATCGCGACCGAGCTCAACGAGGACCACTGGGCCTCCGAAGGCG
GCGCCAAGCTCGTGAGCATGCTGCCGCGCAAGCGCGTGGGCAAGCCCGAAGACCTGGACGGCCTGATCGTGCTGCTGGCC
AGCGGCCAGAGCCATTTCGTGAACGGCGCGGTCATTGCGGCCGACGACGGGTTCGCGCTCTGA

Protein sequence :
MAYSIDLSGRVAFITGASSGLGAQFAKTLARAGAAVVLASRRLEKLKELRARIEGEGGDAHAVELDVTDIGSIKAAVARA
ETEVGPIDILVNNSGVSTTQRLSDVTPDDYDYIFDTNVKGSFFVAQEVGKRMLARADGSAPGTYIGGRIINIASVAALKV
LPQIGTYCMSKAAVVQMTKAMALEWGRFGINVNALCPGYIATELNEDHWASEGGAKLVSMLPRKRVGKPEDLDGLIVLLA
SGQSHFVNGAVIAADDGFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 7e-30 47