|
Name : Vapar_3108 (Vapar_3108) Accession : YP_002944993.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 3.5.4.26 Position : 3268580 - 3269707 bp Length : 1128 bp Strand : + Note : KEGG: pna:Pnap_2915 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding DNA sequence : ATGACAAATGCAAATGAAATTGTGAATTTCATGGCCCAGGCCCTGGATCTCGCACGCCAGGCCGGGCCGGAGACCGATCC CAATCCGCGCGTCGGCTGCGTGCTGGTGGACGCGAACGGCGCGGTGATCGGCCAAGGCCGCACCCAGCAGGTCGGCGGCC CGCATGCCGAGGTCATGGCGCTGCGCGATGCCGCGGCGCGCGGCCATTCGGTGGCCGGCGCCACCGCCTTCGTCACGCTC GAGCCCTGCGCGCACCATGGCCGCACCGGTCCTTGCTGCGATGCGCTGGCGGCGGCGGGCATCGGCCGGGTGGTGGCGTC GTTGGCCGATCCCAACCCGCTGGTCGCGGGCAAGGGCTTCGAACGGCTGCGCGCGGCAGGCGTGGCGGTCGAGGTAGGGC CGGGCGCGGAGGAAGCGCGCGAACTCAACATCGGCTTTTTCAGCCGCATGGTCCGCAAGACGCCCTGGGTGCGGCTCAAG GCCGCCGCCTCGCTGGACGGCAAGACCGGCCTGCGCAACGGCGTGAGCCAATGGATCACCTCGGAACCGGCGCGCGCCGA CGGCCACGCCTGGCGGGCGCGGGCCAGCGCGGTGCTGACCGGCGTGGGCACGGTGCTGGAGGACGATCCCCGGCTCGACG TGCGGCTTGTGGAAACCACGCGCCAGCCGCACGTGGTGATAGTCGACAGCCAATTGCAGACCCCGCCCGGCGCGCGGATC TTCATGGCCGGGCGGCCCGTCTGGATCTACGCCGCGGCGCAGGACGAGGCCAAGGCCGCCGCGTTACAAGCGCGTGGCGC CACCATTGCCTACCTGCCCAATGCACAGGGCAAGGTCGACCTGGCCGCAATGCTGCGGGATCTGGCCCGGCGCGAGGTCA ACGAGCTCCACGTCGAGTCCGGCCACAAGCTCAACGGCTCGCTGCTGCGCGAGGGCCTGGTCGACGAACTGCTGGTGTAC CTGGCGCCCAAGCTCATCGGCGACGGGCTCGACATGGCTTCCGGCATCCACACCGGCGGACCGCTGGCCGACCTGGCCGG CGCGCTGCCGCTGGAATTCAGGACCATCGAGCGGATCGGGCCGGACCTGCGGATCGTGGCCCGGGTCGCCGGAAGGGACG CTTTCTAG Protein sequence : MTNANEIVNFMAQALDLARQAGPETDPNPRVGCVLVDANGAVIGQGRTQQVGGPHAEVMALRDAAARGHSVAGATAFVTL EPCAHHGRTGPCCDALAAAGIGRVVASLADPNPLVAGKGFERLRAAGVAVEVGPGAEEARELNIGFFSRMVRKTPWVRLK AAASLDGKTGLRNGVSQWITSEPARADGHAWRARASAVLTGVGTVLEDDPRLDVRLVETTRQPHVVIVDSQLQTPPGARI FMAGRPVWIYAAAQDEAKAAALQARGATIAYLPNAQGKVDLAAMLRDLARREVNELHVESGHKLNGSLLREGLVDELLVY LAPKLIGDGLDMASGIHTGGPLADLAGALPLEFRTIERIGPDLRIVARVAGRDAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-43 | 42 |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-43 | 42 |
