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Name : Vapar_2744 (Vapar_2744) Accession : YP_002944632.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2892165 - 2893799 bp Length : 1635 bp Strand : + Note : PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: pna:Pnap_2014 ABC transporter DNA sequence : GTGAGCCAAATCAAGCATCTCCAGCCGCTGCTGGACGTGAAAGAGCTGCGCGTGGCCTTCGGCGGCAAGGAGGTGGTGCA CGGCATCGACTTCCGCATTGCCGCGGGCGAGAAGCTCGCGCTGGTCGGCGAATCGGGTTCGGGCAAGACCGTGACGGCGC TGTCGCTGCTGCGCCTGGCGCAGAACGCCGACGTGGCCGGCGCCGCGACCTTGTTCGGCTCCGCAGATGCGCCAAGCGGG CGCGACCTGCTCTCGATTCCGGAGCGTGAGCTGCGCGGCATCCGCGGCAAGGAGATCGCGATGATCTTCCAGGAGCCGAT GACCGCCCTCAACGCGCTCTACACCGTGGGCGACCAGATCGCCGAGGTGCTCGAACTGCACGAGGGCCTGTCGGCGCGCG CGGCCCAGGCGGCCGCCGTGCAGCTGCTGGCCGACACCGGCATTCCGGAGCCGGCGCGGCGGGCGAGGGCGTTTCCGCAC CAGCTCTCGGGCGGCCAGCGCCAGCGCGCGATGATCGCCATGGCGCTCGCCTGCAAGCCGCGCCTGCTGTTGGCCGACGA GCCGACCACCGCGCTCGACGTCAGGGTGCGCGCGCAGATCCTCGAGTTGCTCGCCGATCTGCAGCGCAAGCATGGCATGG CCGTGCTGCTCATCACGCACGACCTCAACCTGGTGCGCCGCTTCGCCGACCGGATTGCCGTGATGGAAGACGGCCACGTG GTGGAGCAGGGCGCCGTGGCGGCCGTGTTCGAGGCGCCGCAGCACGCCTACACCCGCAAGCTGATCGACAGCCACCCGGA GCGCGATGTCATCGCCGTGCCCGCGGGTGCCGGCGCGCGGCCGGTGCTCGAGGCCACCGGCCTGTGTGTGAGCTACCCCG TGCCGCGGCCCGGTTTTGCCGGCTGGTTCCGCAAGGGCGAATTCATTGCGGTGCAGAACGCGGATTTCCGCATCGCACCG GGCGAAACGCTGGGCGTGGTCGGCGAGTCCGGATCGGGCAAGTCCACGCTGGCGCTGGCCGCCCTCGGGCTGCTGAAGCA CCAGGGCGCGCTCAAGGTGGACGGCAAGGGCTGGGCGGTGGACCGGAGTTCCGACCTGGCCTTGCGCCGGGTCATGCAGG TGGTTTTCCAGGACCCGTTCTCCTCGCTCTCGCCGCGCATGACGGTCGAGCAGATCGTGGGCGAGGGGTTGCGCGTGCAC GCGCCTGAGCTCGACACGGCGCAGCGCCGCGCGCGGGCGCTGGCAGCGCTGGCCGACGTGGGCCTGGGCGAGGCGCAGTT TCCCTCGCTGCTCGACCGCTATCCGCACGAGTTCTCGGGCGGACAGCGCCAGCGGCTCGCGATTGCGCGCGCGCTCATCG TCGACCCGCAGCTGCTGGTGCTCGACGAGCCCACCAGCGCGCTCGACGTGACCATCCAGAAGCAGGTGCTGGGCCTGCTG CAGCGCCTGCAGCGGGAGCGCGGCCTGAGCTACCTGCTGATCACGCACGACGTGGAGGTGATCCGCGCCATGGCGCACCA GGTCATCGTGATGAAGGACGGCGCCATCCTCGAAGCCGGCGCCGTGGAGCGCGTGCTCGACGCGCCCGAGCACCCCTACA CCAAGAAACTGGTGGCCGCCGCGCTGCTGGAATAG Protein sequence : MSQIKHLQPLLDVKELRVAFGGKEVVHGIDFRIAAGEKLALVGESGSGKTVTALSLLRLAQNADVAGAATLFGSADAPSG RDLLSIPERELRGIRGKEIAMIFQEPMTALNALYTVGDQIAEVLELHEGLSARAAQAAAVQLLADTGIPEPARRARAFPH QLSGGQRQRAMIAMALACKPRLLLADEPTTALDVRVRAQILELLADLQRKHGMAVLLITHDLNLVRRFADRIAVMEDGHV VEQGAVAAVFEAPQHAYTRKLIDSHPERDVIAVPAGAGARPVLEATGLCVSYPVPRPGFAGWFRKGEFIAVQNADFRIAP GETLGVVGESGSGKSTLALAALGLLKHQGALKVDGKGWAVDRSSDLALRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVH APELDTAQRRARALAALADVGLGEAQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLL QRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILEAGAVERVLDAPEHPYTKKLVAAALLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-70 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-70 | 41 |
