Gene Information

Name : Vapar_0243 (Vapar_0243)
Accession : YP_002942172.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 258896 - 260356 bp
Length : 1461 bp
Strand : -
Note : KEGG: bbr:BB0736 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
ATGAGAGTCGATCACCTGATCGCCGGCAAGGCTGTTGCCGGCAGCGAATACTTCGAAACCGTCAACCCCGCCACGCAGGA
GGTGCTGGCCGAAGTCGCCTCGGGCGGCGAAGCCGAAGTGAACGCGGCCGTGGCTGCGGCGAAGGAGGCGTTCCCCAAGT
GGGCCGGCCTGCCCGCGCCCGAGCGCGCCAAGCTCGTCCGCAAGCTCGGCGACCTGATCGCGCAGCACGTGCCCGAGATC
GCGCAGACCGAGACCAACGACTGCGGCCAGGTCATCGCGCAGACCGGCAAGCAGCTGATCCCGCGCGCGGCCGACAACTT
CTACTACTTCGCCGAGATGTGCACGCGCGTCGACGGCCACACCTACCCCACGCCCACGCACCTGAACTACACGCTGTTCC
ACCCGGTGGGCGTGTGCGCGCTGATCAGCCCGTGGAACGTGCCCTTCATGACCGCCACCTGGAAGGTCGCGCCCTGCCTG
GCCTTCGGCAACACCGCGGTGCTGAAGATGAGCGAGCTCTCGCCGCTGACGGCTGCGCGCCTCGGTGAACTCGCGCTCGA
AGCGGGCATTCCGCCCGGCGTGCTGAACCTGGTGCACGGCTACGGCAAGGAGGCCGGCGAGCCGCTGGTGGCGCACCCCG
ACGTGCGCGCGATCTCGTTCACCGGCTCCACCGCCACGGGCAACCGCATCGTGAAGAGCGCGGGCCTCAAGAAATTCAGC
ATGGAGCTCGGCGGCAAGAGCCCGTTCGTGATCTTCGAGGACGCCGACCTCGACCGCGCGCTCGACGCGGCCGTGTTCAT
GATCTTCAGCAACAACGGCGAGCGCTGCACCGCCGGCTCGCGCATCCTGGTGCAGCAGTCGATCTACGCCGACTTTGCCG
CCAAATTCGCGGAGCGCGCCAGGCGCATCGCGGTGGGCGACCCGCTCGACGAGAAGACCATCGTGGGCCCGATGATTTCG
CAAGCGCACCTGGCCAAGGTGCGCAGCTACATCGAGCTGGGTCCGAAGGAAGGCGCGACGCTCTTGTGCGGCGGCCTCGA
TGCACCGGCCAACCTGCCCGAGCGCGTTCAGCGCGGCAACTACGTGATGCCCACCGTGTTCGCCGACGTCGACAACCGCA
TGAAGATCGCGCAGGACGAGATCTTCGGCCCCGTCGCCTGCCTGATCCCGTTCAGGGACGAGTCGCACGCGATAGCACTC
GCCAACGACATCCCATACGGCCTGTCGAGCTACGTCTGGACCGAGAATATCGGCCGCGCCCACCGCGTGGCTGCCGCGGT
GGAGGCCGGCATGTGCTTCGTCAACAGCCAGAACGTGCGAGACCTGCGCCAGCCCTTCGGCGGCACCAAGGCCTCGGGCA
CGGGGCGCGAAGGCGGCACCTGGAGCTACGAGGTGTTCTGCGAGCCGAAGAACGTGGCGGTGTCGATGGGCTCGCATCAC
ATTCCGCATTGGGGAGCTTGA

Protein sequence :
MRVDHLIAGKAVAGSEYFETVNPATQEVLAEVASGGEAEVNAAVAAAKEAFPKWAGLPAPERAKLVRKLGDLIAQHVPEI
AQTETNDCGQVIAQTGKQLIPRAADNFYYFAEMCTRVDGHTYPTPTHLNYTLFHPVGVCALISPWNVPFMTATWKVAPCL
AFGNTAVLKMSELSPLTAARLGELALEAGIPPGVLNLVHGYGKEAGEPLVAHPDVRAISFTGSTATGNRIVKSAGLKKFS
MELGGKSPFVIFEDADLDRALDAAVFMIFSNNGERCTAGSRILVQQSIYADFAAKFAERARRIAVGDPLDEKTIVGPMIS
QAHLAKVRSYIELGPKEGATLLCGGLDAPANLPERVQRGNYVMPTVFADVDNRMKIAQDEIFGPVACLIPFRDESHAIAL
ANDIPYGLSSYVWTENIGRAHRVAAAVEAGMCFVNSQNVRDLRQPFGGTKASGTGREGGTWSYEVFCEPKNVAVSMGSHH
IPHWGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-142 68
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-55 42