Gene Information

Name : Vapar_2244 (Vapar_2244)
Accession : YP_002944144.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 2389385 - 2391751 bp
Length : 2367 bp
Strand : +
Note : PFAM: type III restriction protein res subunit; DNA primase small subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; KEGG: tmz:Tmz1t_0307 type III restriction protein res subunit

DNA sequence :
ATGGCGGACCGCGATGAACTCACCAAGCTGCGCGCGGAGAACAGCCGGCTGATCGCGCTGCTCGAATCCCACGGCATCGA
ATGGCGGACGCGGCAGCAGCCGTCCCCATCGCCCGTCGAGCCATCGAGACTGTCCACTGACGAGAAGGTCGCTATCTTCC
GACGGCTCTTCCGCGGTCGTACCGATGTGTTTCCCGTCCGATGGGAGAGCAAGACCACCGGCAAGTCGGGCTACGCGCCG
GCTTGCGCGAATGAGTGGCGCACCGGGGTGTGCGAGAAGCCGCGCATCAAGTGCGGAGACTGCGGCAATCGTCTGCTCGT
CCCGCTGTCGGACGCGGTGATCTACAAGCACCTGGCTGGCGAGCATACGGTCGGGGTGTATCCGCTGCTGGAGGACGACA
GCTGTCATTTCCTGGCCGTCGACTTCGACGAGGCCGAATGGCGGGACGATGCGCAGGCGTTCATGCAGTCTTGCGCGGGG
CTGGGCGTGCCAGCAGCGCTGGAGGTCTCGCGCTCCGGCCAAGGCGCCCATGCCTGGGTGTTCTTTGCTGCTCGCGTGTC
GGCGCGCGATGCCCGCCGCCTCGGCACAGCCATCATCAGCCACACCTGCGCGCGCACGCGGCAGCTCCGGCTCACTTCCT
ACGACCGACTGTTTCCGAATCAGGACACGATGCCCAGAGGCGGCTTTGGTAACCTGATCGCCTTGCCCCTGCAGAAGGGG
CCGCGCGAAAGGGGCTACAGCGTCTTCGTCGACGCCGAGCAGCGCCCCTACCCGGACCAGTGGGCGTTCCTGGCCTCCCT
CCAGCCGATGGCCGCACACGACATCGAGCCGACCATCCTGCGGGCCACGAGTGGCATTCATCCGTTGGATATCACCTTCA
TTGATGACGAGGATCTGGCCACGCCCTGGAAACGCGAAAGCACAGCGTCGAAGAAGTTGCCGGGAACCATGCCCCGCTCG
CTGACGATGACCGTGGCCAACCTGATCTACTTCGAGAAGGCGCAACTGCCTCAGCCGCTCGCCAATCGACTGATCCGTCT
GGCGGCGTTCCAGAACCCCGAGTTTTACAAGGCACAGGCGATGCGGGTGTCGGTGTGGGACAAGCCACGGGTCATCGGCT
GCGCCGAGAACTACCCGCAACACATCGCCTTGCCTCGCGGGTGTCTGGATGCCTCCCTGTCGCTGTTGCGCGAGAACGGC
ATCACGTGTGAGCTGCGAGACGAGCGCTTCAAGGGCCAGCCGCTGGACGTGTCGTTCGTCGGCAATCTGCGTCAAGACCA
GCAGACCGCCGTCGCTGCGATGCTGCCGTTTGATGCCGGGGTGCTGTGCGCACCGACCGCCTTTGGCAAGACAGTCACCG
CCGCGGCGATGATCGCCGAGAAAGGCGTCAACACGCTGATACTGGTGCATCGCACGGAACTGTTGAAGCAATGGCAGGAG
CGGCTGCAGACCTTTCTGGGCGTCGGTACGGGCGTGGTCGGCACCATTGGCGGCGGCAAGGCCAAACCGACCGGCAGGAT
CGACATTGCCGTGATGCAGTCTTTGTCCCGCCGGGGTGAGGTGAACCCGCTGGTCGAGGACTACGGCCACGTGATCGTCG
ACGAGTGCCACCACGTCGGCGCGGTTTCGTTCGACGCCATCCTGAAGCGGACCAAGGCGAAATACGTGCTCGGCCTGACC
GCCACGCCGTTCCGACGCGACGGGCAGCAGCCGATCATCTTCATGCAGTGCGGGCCGATCCGTCACACGGCGGCCACGCC
GGCCGGGGCGCCGCACGATCTGGAGGTGGTGCCGCGGTCCCGCCATGCCCGGATCGATTTGCCGCAAGATGCCGGCATCC
AGAATGTATTCCGGCATCTGGCGAACGATCAGGCGAGGACTGAAGCCATCGCAGCCGAGGTGCGCGATGCCTTCGCGCAG
GGGCGCAAGATACTGGTGCTGACGGAGCGCACGGAACATCTCAACGCGATTGAAGCAGCCCTCGGTGGCCTGGGGCCGGA
CTTCTTCGTACTGCATGGCCGGATGTCCAGAAAGCAGCGTGCGGCGCTGGTGGCAGGCCTTGATGCGTTGGCGCCCGACG
CACCGCGGGTCCTCCTGGCGACCGGCAAGTTGGTTGGCGAGGGCTTCGACCACCCGCCGTTGGACACGCTGGTGCTCGCC
ATGCCGGTGTCCTGGAAAGGGACGCTGCAGCAGTACGCCGGCCGCCTGCACCGGGAGCACGTCAGCAAGGCCGACGTGCG
GATCATCGACTTCGTGGACACCGGCCATCCGGCGTTGCTGCGTATGTGGGATAAGCGTCAGCGCGGATACCGAGCGATGG
GATATCGGACCGACGCCGATACCGTGCCGAATGAAGGCCTGTTTTGA

Protein sequence :
MADRDELTKLRAENSRLIALLESHGIEWRTRQQPSPSPVEPSRLSTDEKVAIFRRLFRGRTDVFPVRWESKTTGKSGYAP
ACANEWRTGVCEKPRIKCGDCGNRLLVPLSDAVIYKHLAGEHTVGVYPLLEDDSCHFLAVDFDEAEWRDDAQAFMQSCAG
LGVPAALEVSRSGQGAHAWVFFAARVSARDARRLGTAIISHTCARTRQLRLTSYDRLFPNQDTMPRGGFGNLIALPLQKG
PRERGYSVFVDAEQRPYPDQWAFLASLQPMAAHDIEPTILRATSGIHPLDITFIDDEDLATPWKRESTASKKLPGTMPRS
LTMTVANLIYFEKAQLPQPLANRLIRLAAFQNPEFYKAQAMRVSVWDKPRVIGCAENYPQHIALPRGCLDASLSLLRENG
ITCELRDERFKGQPLDVSFVGNLRQDQQTAVAAMLPFDAGVLCAPTAFGKTVTAAAMIAEKGVNTLILVHRTELLKQWQE
RLQTFLGVGTGVVGTIGGGKAKPTGRIDIAVMQSLSRRGEVNPLVEDYGHVIVDECHHVGAVSFDAILKRTKAKYVLGLT
ATPFRRDGQQPIIFMQCGPIRHTAATPAGAPHDLEVVPRSRHARIDLPQDAGIQNVFRHLANDQARTEAIAAEVRDAFAQ
GRKILVLTERTEHLNAIEAALGGLGPDFFVLHGRMSRKQRAALVAGLDALAPDAPRVLLATGKLVGEGFDHPPLDTLVLA
MPVSWKGTLQQYAGRLHREHVSKADVRIIDFVDTGHPALLRMWDKRQRGYRAMGYRTDADTVPNEGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 71
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 71