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Name : Vapar_2113 (Vapar_2113) Accession : YP_002944014.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2254579 - 2256090 bp Length : 1512 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: mms:mma_2792 transposase IstA DNA sequence : ATGGACATGATTGGCAGGATCCGACGGCTGCACGCGAGGGACAAGCTGTCGGAGCGCGAGATAGCGCGCATGACAGGGCT GTCGCGCAACACGGTGTCAAAGTGGCTGCGCGCACCGGCAGCCGAGGCGCCGAAGTACCGGCGCGAAGCAAGGCCGAACA AGCTGAGTGCATTCGAGACAGCGCTGAAGCAGGCATTGACGGCCGATGCGCGACGGCCCAAGCACGAGCGGCGCACGGCA CGCGCGCTGCACGCTGAGATCAAGGCGGCGGGCTACGACGGCGGGTACTCGGCCATCACTGACTTCGTTCGAGCGTGGCG CCAAGGCGAGGGACAGGCAGTCAACGTCACCGCGTTCGTTCCACTGACCTTCGAGCTCGGCGAGGCCTTCCAGTTCGATT GGAGCGAAGAAGGCCTGGTCGTCGGCGGCATCTATTACCGCATGCAGGTGTCGCACCTGAAGCTGTGCGCGAGCCGTGCG TTCTGGCTGGTGGCGTACCCGAGCCAAGGTCACGAGATGCTGTTCGACGCCCACACGAGGTCGTTTGCAGCGCTGGGTGG TGTGGCGCGCCGCGGGATCTACGACAACATGCGCACCGCCGTCGATAAGGTTCACAAGGGTAAGGGTCGCACCGTCAATG CCCGCTTCGCCGTGATGTGCGCGCACTACCTGTACGACCCCGACTTCTGCAACGTCGCCTCGGGCTGGGAGAAGGGGCGC GTGGAGAAGAACGTACAGGACAGCCGTCGGCGCATCTGGATCGAGGCGGGCCGGCGCCGCTTCGGCTCCTTCGTCGAACT CAATGCCTGGTTGGCGGAGCGATGCCGAGCGCTGTGGAACGAGGTGCGCCACCCCGAGCACAGCCAGTTCAGCGTGGCCG AGATGCTCGAGCACGAGCGTCCCCACCTGATGCCCATGCCTGAGCCCTTCGATGGCTACGTAGAGAAGCCTGCCCGGGTG TCGAGCACGTGCCTGGTGTCGGTGGCACGTAACCGCTACTCGGTGCCCTGCGAGCTGGCCGGGCAGATGGTCAGCACGCG GCTGTATCCGGGCGGCATCGTGGTTGTTGCCGATGATGCGGTGGTTGCGCGACACGAGCGCCTGAGCGCCTCTGGCGGCA CCCGCTACGACTGGCAGCACTACATTCCGCTCATCCAGCGCAAGCCTGGTGCATTGAGGAACGGTGCGCCCTTCGCAGAC ATGCCCGAGGCACTGCAGCAACTGCGCCGCGGCCTGCTGCGCCAGGCCGGTGGAGATCGCGTGATGGCGCAGGTGTTGGC CATCGTGCCGACGGCGGGGCTGGACGCGGTGATCGTGGCGGTCGAGTTGGCGCTGCAGAGTGGTCCGCCATCGGGTCGGG TCAGCGTGGAGCACGTCGTCAACGTCCTCGGGCGGCTCACCGCACCGGCAGCACCGCAGAGTGCGCAGACGGCGCTGCAG ATCGTCACGCCGCCGCTGGCCAACACGGCCCGATACGACGGCTTGCGTGGACAGGAGGTGGACCATGCGTGA Protein sequence : MDMIGRIRRLHARDKLSEREIARMTGLSRNTVSKWLRAPAAEAPKYRREARPNKLSAFETALKQALTADARRPKHERRTA RALHAEIKAAGYDGGYSAITDFVRAWRQGEGQAVNVTAFVPLTFELGEAFQFDWSEEGLVVGGIYYRMQVSHLKLCASRA FWLVAYPSQGHEMLFDAHTRSFAALGGVARRGIYDNMRTAVDKVHKGKGRTVNARFAVMCAHYLYDPDFCNVASGWEKGR VEKNVQDSRRRIWIEAGRRRFGSFVELNAWLAERCRALWNEVRHPEHSQFSVAEMLEHERPHLMPMPEPFDGYVEKPARV SSTCLVSVARNRYSVPCELAGQMVSTRLYPGGIVVVADDAVVARHERLSASGGTRYDWQHYIPLIQRKPGALRNGAPFAD MPEALQQLRRGLLRQAGGDRVMAQVLAIVPTAGLDAVIVAVELALQSGPPSGRVSVEHVVNVLGRLTAPAAPQSAQTALQ IVTPPLANTARYDGLRGQEVDHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 2e-149 | 67 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-95 | 48 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 5e-79 | 44 |
