Gene Information

Name : Vapar_1211 (Vapar_1211)
Accession : YP_002943128.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1324536 - 1325213 bp
Length : 678 bp
Strand : +
Note : KEGG: pol:Bpro_1015 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGAGTGACGTGGTTCTCAAGGCGCGCGGCCTCACCAAGCGCTTTCACGAGGGGCGCATCGACCTCACGGTGCTGCACGG
CGTCGACCTGGACGTGCGCGCCGGGGAGACGCTGGCCATCGTCGGCGCCTCGGGCTCGGGCAAGAGCACGCTGCTGCACC
TGATGGGCGGGCTCGATGCGCCCACCGCCGGCAAGGTCGAGCTGCTCGGCAAGGACATCGCGCATGCCGACGCGGCCGAG
CAGGGACGGCTGCGCAACCTGCACCTGGGCTTCGTCTACCAGTTCCACCACCTGCTGCCCGAGTTCAGCGCGCTTGACAA
CGTGGCGATGCCGCTCAAGATCCGGCGCATGGATTCCGCACAGGCGGCGGCCTCGGCCACGAAGATCCTCGAAAGCGTGG
GCCTGGGCGAACGCCTGCATCACCGGCCGGCCGAGCTCTCGGGCGGCGAGCGCCAGCGCGTGGCCATTGCGCGCGCGCTG
GTCACGCAGCCGGCCTGCGTGCTGGCCGACGAGCCCACGGGGAACCTCGACCGCAGCACGGCGGACACGGTGTTCGCGCT
GATGATCGAGCTCGCGCACAAGCACCGCACGGCCTTCGTGATGGTCACGCACGACCAGGAACTCGCAAAGCGCTGCGACC
GCGTGCTGCAACTGGTGGCGGGACGTCTGGCGGGTTGA

Protein sequence : 
MSDVVLKARGLTKRFHEGRIDLTVLHGVDLDVRAGETLAIVGASGSGKSTLLHLMGGLDAPTAGKVELLGKDIAHADAAE
QGRLRNLHLGFVYQFHHLLPEFSALDNVAMPLKIRRMDSAQAAASATKILESVGLGERLHHRPAELSGGERQRVAIARAL
VTQPACVLADEPTGNLDRSTADTVFALMIELAHKHRTAFVMVTHDQELAKRCDRVLQLVAGRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_1211 YP_002943128.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-33 45
Vapar_1211 YP_002943128.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 3e-37 43