|
Name : Vapar_1072 (Vapar_1072) Accession : YP_002942989.1 Strain : Genome accession: NC_012791 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1175760 - 1177151 bp Length : 1392 bp Strand : - Note : KEGG: dia:Dtpsy_0645 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA DNA sequence : ATGCGCCACCCCCTGCCCTACGCGTTCGCACGCAGCCAGCAGCTGCTGCTCGAAGAAGCCGACGACGGCAGCCACACGCT GTGGATGTCGAGCCATCCCTCGCGCAGCGCGGTCGGCGAGGTCACGCGCAAGTACGGCGTGCAGGCCTTCGAGGTACTGG CCGACGGCCCGCTCGCGCAGCGCATCAGCGCGGCCTATGCGCAGGGCGAATCGAGCGCCGCCGCGGTGGTGAGCGAGGTG CAGAGCGACGCCGACCTCTCGCGCATGATGCAGGAGCTGCCGGCGGTCGAGGACCTGCTGGAAAGCGCCGGCGACGCGCC CATCATCCGCATGCTCAACGCGCTGCTCACGCAGGCCGCGCGCGACGGCGCGAGCGACATCCACATCGAGCCCTACGAGC GCACCTCGTCCGTGCGCTTTCGCATCGACGGCACGCTGCGCGAGGTGGTGCAGCCCAACCGCGCGCTGCACGCCGCGCTG ATCTCGCGCCTGAAGATCATGGCCGACCTCGACATCTCCGAGAAACGGCTGCCGCAGGACGGGCGCATCAGCCTTCGCAT CGGCACGCGCGCGGTCGACGTGCGCGTCTCCACGCTGCCCAGCGCGCACGGCGAGCGCGCGGTGCTGCGCCTCCTGGACA AGAGCGAATCGAAGCTCACGCTCGAATCGGTCGGCATGCAGGGCGACACGCTCGCGCGCTTCGAGAAGCTCATTGCGCAG CCGCACGGCATCATCCTGGTGACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCCGCGCTGGCCCGGCTGGA TGCGAGCCGCAGCAACATCATGACGGTGGAAGACCCGATCGAATACGAACTGCCGGGCGTGGGCCAGACGCAGATCAACG CCAAGATCGAGCTCACCTTCGCGAAGGCGCTGCGCGCGATCCTGCGGCAGGATCCGGACGTGATCATGATCGGCGAGATC CGCGATTTCGAGACCGCGCAGATCGCCATCCAGGCCTCGCTCACCGGCCACCTGGTGCTTGCCACGCTGCACACCAACGA TTCTGTCAGCGCCGTCACGCGCCTGACCGACATGGGCGTGGAGCCGTTCCTGTTGAGCTCATCGCTCCTGGGCGTGCTCG CGCAGCGGCTGGTGCGCAAGGTCTGCACGGCCTGCGGCGGCGCCGGCTGCGAGGCGTGCGGGCAGACCGGCTACCAGGGC CGCACCGGCATCTTCGAGCTGCTGGTGGCCGACGAGACCGTGCAGGGCCTGATCCACAGCAAGGCAGCCGAGAGCGAACT GCTCCAGGCCGGCGCGCGCGGCGGCCTGCGCCTGATGCGCGAAGACGGCGAACGGCTGGTGCAGGCCGGCATCACCTCGC GCGCCGAACTGCTTCGCGTCACGCGCGACTGA Protein sequence : MRHPLPYAFARSQQLLLEEADDGSHTLWMSSHPSRSAVGEVTRKYGVQAFEVLADGPLAQRISAAYAQGESSAAAVVSEV QSDADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAAL ISRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLTLESVGMQGDTLARFEKLIAQ PHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIEYELPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEI RDFETAQIAIQASLTGHLVLATLHTNDSVSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKVCTACGGAGCEACGQTGYQG RTGIFELLVADETVQGLIHSKAAESELLQAGARGGLRLMREDGERLVQAGITSRAELLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-96 | 56 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-96 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Vapar_1072 | YP_002942989.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-95 | 55 |
| Vapar_1072 | YP_002942989.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-102 | 51 |
| Vapar_1072 | YP_002942989.1 | general secretory pathway protein E | VFG0182 | Protein | 8e-105 | 51 |
