Gene Information

Name : Kole_0884 (Kole_0884)
Accession : YP_002940597.1
Strain : Kosmotoga olearia TBF 19.5.1
Genome accession: NC_012785
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 931045 - 933429 bp
Length : 2385 bp
Strand : -
Note : PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: baa:BA_0670 Clp_N, Clp amino terminal domain

DNA sequence :
ATGATAAATTATGAAGAATACACGGAGAAGGCGAAAAAAATCCTGATGGATGTTCAGGATATATTGACAAGATATCGCCA
GAATCAATTTGGCAGCGAGCATATTTTGCTTGCTATCCTCGAAGATGAGGATAACTTTGCTTATGAGATTCTGAAAGAGT
TGAAGGTTAATATGAGATCCCTTCGCCGTGATGTCGAAGAGGTTATTGCGCGCTATGGTGGGCGTGTTGAATCTTCCAAT
CAGATTTATATTACACCCGACGCACGCCACATCATAGAAGCAGCCAGAAACGAAGCCAAAAGAATGCACGATGCCAAAGT
TGGTACGGAACATCTGTTACTTGCTATGCTTAGAGAGGTTTCGTCAGTAGCGGCAAGAATCCTGATGAAACACGGATTGA
ACGTTGATACCGTTTACAATGCCATACTGAGTGCCAGGCAAAAGGGTGAAGCGTCCGAAAACGAGAATGTTGATGTTCTC
AAGCGTTTCACCATAGACTTAACCGATTTGGCAAAGCAAGGAAAACTGATGCCTGTTATAGGCAGGGATGAAGAAATAAG
AAGGGTCATCCAGATACTCGGTAGAAAGACCAAAAACAATCCTGCCTTAGTCGGGGAACCTGGTGTTGGTAAAACCGCAA
TTGTCGAGGGGTTGGCTCAGAGAATCGTTGATGGTGACGTTCCCGAATACCTGAAAAACAAAAAAGTGCTTGCTCTGGAT
ATGGGAAGAGTTGTTGCTGGAACCAAGTTCCGTGGAGAATTTGAAGAGAGAATGAAGGGGATCATTGATGCGGTGAAACG
TCTTGCTGGAGAAGTGATTTTGTTCATAGATGAGATTCATACCGTTGTGGGTGCCGGTTCTGCGGAGGGTTCAATGGATG
CTGCCAACCTTATGAAACCAGCTCTCGCGAGAGGAGAGCTTCAATGTATAGGGGCAACTACTCTCGATGAGTATAGAAAG
TACATCGAAAAAGACAGGGCTCTTGAAAGACGATTCCAGCCAGTTTATGTAGACGAACCTTCAAGGGATGAGGCGCTGGA
AATTGTAAAAGGATTGCGAGAGTCGTATGAAAAGCATCACCAGGTTAAGATAACGGATAAAGCTCTTGAGGCGGCCGTTG
ATCTAAGTATGAAATACATAACAGACAGATACCTACCAGACAAGGCTATTGATCTTATAGATGAAGCTGCATCTTATGTA
CGCCTTAAAGCCGGATATCTTCCGGATGATTTGAGGAAGATGGAAAAAGAGCTCCAGGAGCTCGACAACAGGATATCCGA
GCTCGTTCAGGAAGGTGAATACCAGAAAGCCGCGGAACTCAAAACGAAATTCGAGAAAATCAGAAAAGAATACGAAGCCA
GAAAGGCTGAATGGTTCAAGAGTGACAACGCTCAGAACAATGAAGTTACGGAAGAAATAATTGCTTCAATCGTCGAGCAG
TGGACCGGAATACCAGCCGGGAAACTTCTCGAATCTGAAAGGGATAAATTGAAAAATCTCGAAAAGCTAATTCACGAACG
TTTCATAGATCAGGAAGAGGCTGTTAGTGCGGTTGCCCATACCATAAGAAGGGCACGTGCTGGTCTAAAAGCACCGAACC
GACCATGGGGATCATTCCTATTCCTTGGACCAACAGGTGTCGGGAAGACGGAACTTGCGAAAACACTGGCAAATATACTT
TTTGGTAGCGAAGATGCGATGATAAGAATCGATATGTCCGAATACATGGAAAAGCACTCTGTATCGAGGCTTATTGGTGC
GCCTCCGGGATACGTCGGATACGAAGAAGGTGGTCAATTAACTGAGGCGGTTAGAAGAAGACCCTACTCCGTCATATTAC
TTGATGAAGTTGAAAAAGCACATCCTGATGTTCACAATGTTCTACTTCAAGTGATGGACGATGGAAGATTAACTGATGGA
AAAGGAAAAACCGTTAATTTCTCCAACACCATACTCATCATGACCAGTAATGTGGGTTCTGAAGAGATGACGAAGGGTAA
ATTCGACGAAAACACAACGGCACTTGTCGAACAGAAACTTAAGTCAGCATTCAAACCGGAGTTCCTGAATAGACTCGATG
CCATCGTGTTCTTCAAGCCGTTGAGCAAAGAGCACCTGAGAGAGATCGTTAAATTGAGATTGAAAGAGGTCGAGGAAAAA
CTCAGCGAACAGGGTATATCCATGCGTTACACCGATAAAGCCGTCGATTACCTTGCGGATAGAGGATATGATCCCGTATA
TGGCGCAAGGCCGATAAGGAGGCTCGTTGAAAGAGATGTGGAAGGACAGATTGCCGACATGATAATCAGCGGCGAGCTTT
CTGAAAACGATGTTGTCGTTGTGGGTGCCGATGATTTCGGCATAAAGATTTACAAAGAAGAATAA

Protein sequence :
MINYEEYTEKAKKILMDVQDILTRYRQNQFGSEHILLAILEDEDNFAYEILKELKVNMRSLRRDVEEVIARYGGRVESSN
QIYITPDARHIIEAARNEAKRMHDAKVGTEHLLLAMLREVSSVAARILMKHGLNVDTVYNAILSARQKGEASENENVDVL
KRFTIDLTDLAKQGKLMPVIGRDEEIRRVIQILGRKTKNNPALVGEPGVGKTAIVEGLAQRIVDGDVPEYLKNKKVLALD
MGRVVAGTKFRGEFEERMKGIIDAVKRLAGEVILFIDEIHTVVGAGSAEGSMDAANLMKPALARGELQCIGATTLDEYRK
YIEKDRALERRFQPVYVDEPSRDEALEIVKGLRESYEKHHQVKITDKALEAAVDLSMKYITDRYLPDKAIDLIDEAASYV
RLKAGYLPDDLRKMEKELQELDNRISELVQEGEYQKAAELKTKFEKIRKEYEARKAEWFKSDNAQNNEVTEEIIASIVEQ
WTGIPAGKLLESERDKLKNLEKLIHERFIDQEEAVSAVAHTIRRARAGLKAPNRPWGSFLFLGPTGVGKTELAKTLANIL
FGSEDAMIRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVHNVLLQVMDDGRLTDG
KGKTVNFSNTILIMTSNVGSEEMTKGKFDENTTALVEQKLKSAFKPEFLNRLDAIVFFKPLSKEHLREIVKLRLKEVEEK
LSEQGISMRYTDKAVDYLADRGYDPVYGARPIRRLVERDVEGQIADMIISGELSENDVVVVGADDFGIKIYKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 47
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-101 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kole_0884 YP_002940597.1 ATPase AAA-2 domain protein VFG0080 Protein 3e-156 53
Kole_0884 YP_002940597.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 52